Selenomonas ruminantium subsp. lactilytica: SELR_21930
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Entry
SELR_21930 CDS
T01799
Symbol
rpoE
Name
(GenBank) putative DNA-directed RNA polymerase subunit delta
KO
K03048
DNA-directed RNA polymerase subunit delta
Organism
sri
Selenomonas ruminantium subsp. lactilytica
Pathway
sri03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
sri00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
SELR_21930 (rpoE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sri03021
]
SELR_21930 (rpoE)
03400 DNA repair and recombination proteins [BR:
sri03400
]
SELR_21930 (rpoE)
Transcription machinery [BR:
sri03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
SELR_21930 (rpoE)
DNA repair and recombination proteins [BR:
sri03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
SELR_21930 (rpoE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HARE-HTH
DUF6792
Motif
Other DBs
NCBI-ProteinID:
BAL83901
UniProt:
I0GT14
LinkDB
All DBs
Position
complement(2279839..2280168)
Genome browser
AA seq
109 aa
AA seq
DB search
MDFINSSEVDIAYHVLTEKGQTMYYKDLILEVIEKKHKPVQSLSAAISEVYTLINMDSRF
QHEGDQQWGLTEWNPPEVKRHSARGTASRSKAANKAINSRQKKLESIQE
NT seq
330 nt
NT seq
+upstream
nt +downstream
nt
atggattttatcaatagctcggaagtagatattgcttatcatgtgctgacggaaaaaggt
cagaccatgtattacaaggatttgattctcgaggtgatcgagaagaagcataagccggtg
cagtccctgtccgcagctatctcggaagtatatacgctcatcaatatggacagccgtttc
cagcatgaaggcgaccagcagtggggccttacggaatggaatccgcctgaagtgaagcgt
cattctgcccgtggcacggcatcccgttccaaggctgccaacaaggcaatcaacagccgt
cagaagaagctggaaagcattcaggaataa
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