Selenomonas ruminantium subsp. lactilytica: SELR_23810
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Entry
SELR_23810 CDS
T01799
Symbol
hemD
Name
(GenBank) uroporphyrinogen-III C-methyltransferase/uroporphyrinogen-III synthase
KO
K13542
uroporphyrinogen III methyltransferase / synthase [EC:
2.1.1.107
4.2.1.75
]
Organism
sri
Selenomonas ruminantium subsp. lactilytica
Pathway
sri00860
Porphyrin metabolism
sri01100
Metabolic pathways
sri01110
Biosynthesis of secondary metabolites
sri01120
Microbial metabolism in diverse environments
sri01240
Biosynthesis of cofactors
Module
sri_M00924
Cobalamin biosynthesis, anaerobic, uroporphyrinogen III => sirohydrochlorin => cobyrinate a,c-diamide
Brite
KEGG Orthology (KO) [BR:
sri00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
SELR_23810 (hemD)
Enzymes [BR:
sri01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.107 uroporphyrinogen-III C-methyltransferase
SELR_23810 (hemD)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.75 uroporphyrinogen-III synthase
SELR_23810 (hemD)
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Gene cluster
GFIT
Motif
Pfam:
HEM4
TP_methylase
Motif
Other DBs
NCBI-ProteinID:
BAL84089
UniProt:
I0GTK2
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Position
complement(2497073..2498581)
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AA seq
502 aa
AA seq
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MAGMVYLVGAGPGDYRLISMKAVDCLKMADVVVYDRLADDRILRWAPDDAEYIYVGKASS
NHTMKQEDINQLLVDKAKEGKCVVRLKGGDPFVFGRGGEEGLLLRENNLPFEIVPGITSA
ISVPAYAGIPVTHRAVATSFAVVTGHEDPTKGKSNMRWEHLATGVDTLVFLMGVANLPHI
TSKLIENGRSADTPAAVIRWGTKPEQRTLVTTVGKAAEDVAKNGIKPPAIFIVGEVVKLR
DSLQWFDNLSQRPLFGKRILVTRARSQASKLTAKLENLGAEVFEAPAISMADPADNYAAL
DKSIDHLQDYHWLIFTSANGVGRFFARLFKAGKDARALGYAKIAAIGSATAEKLHQYGLN
ADVVPAEYRAEGVLEALKGKLPPHAKILIPRAEEAREILPETLREMGAEVEVAAAYRTVC
GQVDGEALAAEIKDGQFDMVTFTSSSTVKNLVEIIGSADLLKDVKTACIGPITADTAKSL
GIEPDIVAEEYTIDGLVEAICK
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atggcaggaatggtttatttagtaggtgcaggccccggagattaccggcttatcagcatg
aaggcagtggattgcctcaagatggcagacgttgtcgtctatgaccgtctggctgatgac
cgcatcctgcgctgggccccggacgatgccgaatacatctatgtgggcaaggcctccagc
aatcacacgatgaaacaggaagacatcaatcagctgttggtggacaaggcaaaagaaggc
aaatgcgtcgtacgcctcaagggcggcgatcccttcgtctttggccggggcggcgaggaa
ggcctgctgctgcgggaaaacaacctgcccttcgaaatcgtgccaggcatcacttcggcc
atttccgtgccggcttatgcgggcattcctgtaacccatcgggcggtggccacatccttt
gctgtggtgacaggtcatgaagatcccaccaagggcaagagtaacatgcgctgggaacat
ctggccacgggcgtggatacgctggtattcctgatgggcgtagccaacctgccgcatatc
acgagcaaattgattgaaaacggccgcagtgccgatactccggccgctgtaatccgctgg
ggcacgaaaccggaacagcgcacgcttgtgaccaccgtgggcaaggccgccgaagatgtg
gccaagaacggcatcaagccgccggccatctttatcgtaggtgaagtggtcaagctgcgc
gacagcctgcagtggttcgataatctctcccaacgacctctgtttggcaagcggattctc
gtaaccagagcacgcagtcaggcatccaagcttacggcgaaattggagaacctcggagca
gaggtattcgaagcgccggcaatttctatggctgatccggctgacaactatgcggcgctc
gataagtccattgaccatctgcaggattatcactggctgatcttcacgagcgccaatggc
gtaggccgtttttttgcccgcctgttcaaggccggcaaggatgcccgtgctctgggctat
gctaagattgccgcaatcggttcggctacggcagagaaactccatcaatacggcttgaac
gccgatgtagttccggctgaataccgggcagaaggtgtgctggaagccctgaagggcaaa
ctgccgccccatgcgaaaatcctgattccccgtgctgaagaagctcgggaaatcctgccg
gaaactttacgggaaatgggcgccgaagtcgaagtcgccgccgcttaccgcacggtctgc
ggtcaggtggacggcgaagcgctggctgctgaaatcaaagacggccagtttgatatggtg
accttcacgagttcttccacggtcaagaatctcgtggaaatcatcggttcggcagacctc
ttgaaggatgtcaagaccgcctgcatcggccccatcactgccgatacggctaaatctttg
ggcattgagccggacatcgtagcagaagaatataccattgatggcttggtagaagccatt
tgcaaataa
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