Selenomonas ruminantium subsp. lactilytica: SELR_24440
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Entry
SELR_24440 CDS
T01799
Name
(GenBank) putative serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
sri
Selenomonas ruminantium subsp. lactilytica
Pathway
sri00260
Glycine, serine and threonine metabolism
sri00460
Cyanoamino acid metabolism
sri00630
Glyoxylate and dicarboxylate metabolism
sri00670
One carbon pool by folate
sri00680
Methane metabolism
sri01100
Metabolic pathways
sri01110
Biosynthesis of secondary metabolites
sri01120
Microbial metabolism in diverse environments
sri01200
Carbon metabolism
sri01230
Biosynthesis of amino acids
sri01240
Biosynthesis of cofactors
sri04981
Folate transport and metabolism
Module
sri_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
sri00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
SELR_24440
09102 Energy metabolism
00680 Methane metabolism
SELR_24440
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
SELR_24440
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
SELR_24440
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
SELR_24440
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
SELR_24440
Enzymes [BR:
sri01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
SELR_24440
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
OKR_DC_1
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
BAL84152
UniProt:
I0GTR5
LinkDB
All DBs
Position
complement(2568256..2569593)
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AA seq
445 aa
AA seq
DB search
MQNQNLTESLAAFDPEIYGLLQEEVQKQRFTLSLLPTSNAVSPFSAYLKGSIFGNGYLDH
HAVQSHIRLEKIAEERAAKLFGAEHAIVRISDITAASRVVFHALCRDGDTVLSFNRRKSE
HCSGEHLHFEFISFSIEPDTELIDLQRVRQLAEARKPRLIIYSPVNYPRHLDYKELKAIA
ESVGAYLWVDIGQNAGSVAAGCSPSPVPYADVVTFPTGDSLRGPQSAVILTTAKLAELMD
KTVLDTGHSMVKKNVLAALATTFLEAGSEAFKNYCQQVLRNAQAFEHGLQEAGIKTLCGA
TENHLILARLPEGRDAHVMAEKLGEAGFLVKSDLMLTADEGCTFPILRLSVLDPTTRALK
ETAMQTVGRVIGEFMLSAGDEASLQKARTQVRALLLDKPLFSDEWLPANINLTPGYGQKD
LNITQELEAEKKVAQAERMWSFWDS
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgcagaatcagaatttgaccgaaagcctggcggccttcgatccggaaatatatggactg
ctgcaggaggaggtgcagaaacagcgtttcaccttatccctgctgcccacgtccaatgcg
gtatcgcctttcagtgcttatttgaaggggagtatctttggcaatggctatctggatcat
catgcggtgcagagccatatccgactggaaaagattgctgaggagcgggcggcgaagctc
tttggggcggaacatgccattgtgcgcatctctgatattacggcggcctcccgggtggtt
ttccacgccctctgccgggatggggatacggtgctgtccttcaatcgacggaagtctgag
cattgcagcggggaacatcttcattttgaatttatttcctttagcattgaaccggatacg
gaactgatcgatctgcagcgggtacggcagctggctgaggcgcggaagccgcggctgatc
atctattcgccggtgaattatccccgccatttggactataaggaattgaaggccattgcg
gaaagcgtgggcgcatatctctgggtggatatcggccagaatgccggcagtgtggcggcg
ggatgttcgcccagcccggttccctatgccgatgtggtgaccttccccacaggggattcc
ctgcgggggccccagagtgcggtgatcctcaccacggcgaaattggcagaacttatggat
aaaacggtgctggataccggtcattccatggtgaagaaaaatgtgttggcagctttagcg
acgacattcctggaagcgggcagcgaggctttcaagaattattgccagcaggtactgcgc
aacgcccaggcctttgagcatggtttgcaggaggccggcatcaaaacgctttgcggggct
acggaaaatcatttgatcctggcccggctgcctgagggccgggatgcccatgtcatggca
gagaagttgggtgaagctggttttctagtcaaaagcgatctgatgcttacggcagacgaa
ggctgtaccttccccatcctgcgcttgtcggtgctggatcccactaccagagcattgaag
gaaacggccatgcagacggtgggccgggttatcggtgaatttatgctgtcggctggtgat
gaggcgtcgctgcagaaagcacgcactcaggtacgggcgctgttgctggataaaccgctg
ttttccgatgaatggctgcccgccaatatcaatcttacgcccggttatgggcagaaggat
ctcaatatcacccaggagttggaggcggagaagaaagtggcccaggctgagcgcatgtgg
agtttttgggatagctga
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