Selenomonas ruminantium subsp. lactilytica: SELR_26710
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Entry
SELR_26710 CDS
T01799
Name
(GenBank) putative sigma54 specific transcriptional regulator
Organism
sri
Selenomonas ruminantium subsp. lactilytica
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
PTS-HPr
PAS
PAS_9
PAS_4
PAS_8
HTH_50
AAA_5
Mg_chelatase
HTH_8
PAS_7
HTH_1
AAA_2
bpMoxR
MCM
AAA_16
PAS_10
HTH_Tnp_ISL3
ATP-synt_D
Motif
Other DBs
NCBI-ProteinID:
BAL84379
UniProt:
I0GUE2
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Position
complement(2824422..2826098)
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AA seq
558 aa
AA seq
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MYEQEAVVHHESGIHARIAAMIVQRAQELSEKYATPLFLRSRRSERLEMRSLMKLVALKI
RKGDSLFVSAEGDAGRQAVYEMVRFLEGDFEMREPGKIHEMDKLLHENALMQERLQMILE
AVQDGICVVDRTGEITYVNPSYLRIVHKTPEMVMGQNVFKTAPDGNRCAVLRTGVARIGS
ISRKKDGTTVVANVNPIFVNGEIAGVVSVIKDITELQNLMARLSQVSAKAEYLEQELLRT
KKTANAFANYIGKSGKVIDVLALASKAANSGATVLIRGESGTGKEVIAEGIHYASERRRG
PFIRVNCGAIPGTLLESELFGHEKGAFTGAVKRKLGKFELADHGTIFLDEIGEMDKKMQV
KLLRVLQQKEFDRVGGEETVHVDVRIIAATNRHLEDMVKEGTFRDDLYYRLNVIPIILPP
LRERIDDIPLLVEHFIEKISAVTGKTVRSITPEAMDILMRYKWLGNVRELENVIERVITL
MDSDTITVASLPSYIKGEAADREVQRLDEESAVLPWEEYEKRIIAKALKQCGSFNAAAKE
LRITHKTVAAKARKYGLS
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atgtatgaacaggaggccgtggttcatcatgaaagcggcatacatgcacgtattgcagcg
atgatcgttcaacgggctcaagaactaagcgagaaatatgcgacgccccttttcctgcgc
agccggcgcagtgaaaggctggaaatgcgcagcctgatgaagctggtggccctgaagata
cgcaagggagattccctgttcgtatcggcggagggggatgccgggcggcaggctgtctat
gagatggtgcggtttctcgagggagattttgagatgcgggagccgggcaagatccatgag
atggataagctcctgcatgaaaatgccctgatgcaggaacgcctgcagatgatcttggaa
gcggtgcaggatggcatctgcgtggtggacaggacgggagagataacttatgtgaatccc
tcctatctgcgcatcgtccataagactccggaaatggtcatggggcagaatgtcttcaag
acggcgccggatggcaaccgctgcgctgttctgcgcacgggcgtggcccggattggcagc
atcagccgcaagaaggatggtaccactgtggtggccaatgtaaatccgatcttcgtcaac
ggtgagattgccggtgtggtatcggtcatcaaggatatcacggaactgcagaacctgatg
gcgcggttgtcgcaggtatcggccaaggcggaatatctggaacaggaacttctgcgcacg
aagaagaccgccaatgcctttgccaactatatcggcaagagcggcaaggtcatcgatgtg
ctggccctggcttccaaggcggcaaattccggggccacggtgctgatccgcggcgagagc
ggcacaggtaaggaagtcattgccgagggcatccactatgccagcgagcggcggcggggg
cctttcatccgtgtgaactgtggggccattcccggcacgcttttggaatcggagcttttt
ggtcatgaaaagggcgcgttcacgggggccgtcaaacggaaactgggcaagtttgaactg
gctgaccatggcacgattttcctggatgaaatcggcgaaatggacaagaagatgcaggtc
aagctgctgcgggtgctgcagcagaaggaattcgaccgggtgggcggcgaggaaaccgtc
catgtggatgtgcgtatcattgcggccacgaaccgtcatttggaagatatggtgaaggag
ggcaccttccgggatgacctctattaccgtctcaatgtcattcccattatcctgccgccg
ttgcgggagcggattgacgatatcccgctgctggtggagcatttcattgaaaagatcagt
gcggtcaccggcaagacggtgcgcagcatcacgccggaggccatggatatcctgatgcgc
tacaagtggctgggcaacgtgcgggaactggaaaatgtcatcgagcgggtgatcacgctg
atggacagcgataccatcacggtggcttcgttgccttcctatataaaaggggaggcggct
gaccgggaggtgcagcgcctggatgaggaaagcgccgtgcttccctgggaggaatacgag
aagcgcatcattgccaaggccctcaagcagtgcggcagtttcaacgcggcggccaaggaa
ctccggatcacccataagactgtggcagcgaaagcaagaaaatacggactttcttga
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