Selenomonas ruminantium subsp. lactilytica: SELR_27880
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Entry
SELR_27880 CDS
T01799
Name
(GenBank) putative exonuclease
KO
K03547
DNA repair protein SbcD/Mre11
Organism
sri
Selenomonas ruminantium subsp. lactilytica
Brite
KEGG Orthology (KO) [BR:
sri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sri03400
]
SELR_27880
DNA repair and recombination proteins [BR:
sri03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
SELR_27880
Archaeal homologous recombinant proteins
SELR_27880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
SbcD_C
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
BAL84496
UniProt:
I0GUQ9
LinkDB
All DBs
Position
2956021..2957172
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AA seq
383 aa
AA seq
DB search
MKFFHLSDLHIGLKLLNHDLREDQQYILQEIVAHAAQRQPDAVVIAGDIYDKAVPSAEAV
SLFDEFITNLCEALPQAEIMLISGNHDSAPRVNVFRSLLARHHLHMIGLPPMEEDETIAK
VTLQDDHGPVNFYLLPFVKPSMVKAITGTDENGNNLTYDAALHALVARETIDKAQRNVLV
SHQFYLSTGGTAADILRSDSEIITVGNIDAINGDILEQFDYAALGHIHKPQQLNGQECYR
YCGTPLACSISEAGQNKGIIEVELGAKGTVTTTLLPLTPLHPVRKLKDTLKNILAMPSED
YVSITLTDKEDLDVFDMQDRLREAFPNLLEIRRAGQRQVDYGQKVTAQDILSPFDLCKNF
LGDLGLDEEQLLTEIINEVQQAR
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttttccacctttcggacctgcatatcggcttaaaattacttaaccatgatctg
cgggaagaccagcagtatatattacaggaaatcgttgcccatgcggcccagcgtcagcct
gatgctgtcgtgattgcaggcgatatctatgacaaggccgtcccctccgccgaagccgtc
tccctcttcgacgaattcattaccaatttatgtgaagccctgccccaggcagaaatcatg
ctgatttccggcaaccatgacagtgctccccgtgtcaatgtcttccgttccctgctcgcc
cgccatcatctccatatgattggcctgccccccatggaggaagacgagaccattgccaag
gttaccctgcaggatgaccacggccccgtaaacttctacctgttgccctttgtcaaacca
tccatggtcaaggccattaccggcacggacgagaatggcaataatctcacctacgatgcc
gccctccatgcccttgttgcacgtgaaacaatcgataaagcacagcgcaatgtgctcgta
agccatcaattctacctgtccacgggcggcacggccgcagatattctccgcagcgattcc
gaaatcatcacggtgggcaatatcgatgccatcaatggcgatatactggagcaattcgac
tacgcagctctggggcatatccataagccccagcaactgaacgggcaggaatgctatcgc
tactgtgggacccccctggcctgctccatcagtgaagcagggcaaaacaagggcatcatc
gaggtagaactgggggccaaaggtacggtgaccaccaccctcctgcccctcacgccgctg
catcccgtacgcaaattgaaggatacgctcaaaaatatcctggccatgccctctgaggat
tatgtcagcatcaccctgacagacaaggaagacctcgatgttttcgatatgcaggacaga
ttaagggaagccttccccaatcttctggaaatccggcgggcgggacagcggcaggttgat
tatgggcagaaggtcaccgcccaggacatcctctccccctttgacctgtgcaagaatttc
ttaggcgatcttggcctggacgaagagcagctgcttacagaaatcatcaacgaagtacag
caggcacgctga
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