Selenomonas ruminantium subsp. lactilytica: SELR_pSRC101720
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Entry
SELR_pSRC101720 CDS
T01799
Symbol
nfo
Name
(GenBank) putative endonuclease 4
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
sri
Selenomonas ruminantium subsp. lactilytica
Pathway
sri03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sri00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SELR_pSRC101720 (nfo)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sri03400
]
SELR_pSRC101720 (nfo)
Enzymes [BR:
sri01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
SELR_pSRC101720 (nfo)
DNA repair and recombination proteins [BR:
sri03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
SELR_pSRC101720 (nfo)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
BAL84979
UniProt:
I0GW42
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All DBs
Position
pSRC1:complement(165068..165901)
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AA seq
277 aa
AA seq
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MLHIGCHLSSAKGYLAMGKDAVSIKADTFAFFTRNPRGGKAKNIDPADVQTFTDFAEEHH
FTKLVAHAPYTMNLCAAKDNIRTFAHEMLVDDLQRMEATPGNYYNFHPGSHVGQGSKAGI
DLIAAELNRVLTPSQSTTVLLETMAGKGTEIGRTFDELREIMDQVELQDKLGICLDTCHI
WDGGYDIVNDLEGVLEEFDRIIGLERLKAIHLNDSLNPCGSHKDRHACIGKGCIGLDALT
RVINHPKLRNLPFILETPNELPGYAQEISLLRENFQE
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atgcttcacatcggatgccatctatcgtctgccaagggctatcttgccatgggaaaggat
gcggtcagcatcaaggccgacacctttgccttctttacccgcaatcctcgtggcggcaaa
gccaagaatattgaccctgctgacgtgcaaacctttacagattttgcggaggagcatcat
tttaccaaactggtggcccatgctccctacaccatgaacttatgtgccgccaaagacaat
atacgcacctttgctcatgagatgctggttgatgacctgcagcgtatggaagccacaccg
gggaactactacaatttccaccccggcagccatgtgggacagggaagcaaagccggtatt
gacttgattgccgcagagcttaaccgtgtcctcaccccttcccaatccactacggtactt
ctggaaaccatggcaggaaaaggcaccgaaattggacggaccttcgatgaactgcgggaa
atcatggaccaggtggaactgcaggacaagctcggtatctgcctggacacatgccatatc
tgggatggcggttatgatatcgtcaatgacctggagggcgtactggaagagtttgaccgc
attatcggccttgaacggctaaaagccatccacctcaacgacagcctgaatccctgcggc
tctcacaaagaccgccatgcctgcattggtaaaggctgcattggccttgacgcactgaca
agggtcatcaaccatccaaagctgagaaatctcccctttatcctggagacacccaatgaa
cttcccggctatgcccaggaaatttctctgctgagagaaaattttcaggaatag
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