Selenomonas ruminantium subsp. lactilytica: SELR_pSRC400380
Help
Entry
SELR_pSRC400380 CDS
T01799
Name
(GenBank) putative phage tail tape measure protein
Organism
sri
Selenomonas ruminantium subsp. lactilytica
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PhageMin_Tail
SLT
CHAP
Motif
Other DBs
NCBI-ProteinID:
BAL84689
UniProt:
I0GVA2
LinkDB
All DBs
Position
pSRC4:21960..29432
Genome browser
AA seq
2490 aa
AA seq
DB search
MDKNQELRTNLVLEANSALTAIRELSDGLDKISKLKFDNVKSGFDSLTKAFQAAQKMSSK
VAKTQVKEEEELQNLMQKRKKIIADMMNQFSKEKTGLSVKVDMSAAQKELQKTTRMVADM
YDALGQTGKAKTLMGEALNVLAKLSNGGAKGIGLESAKREYKDFERQLQENKAMRAELDR
QVANGIAEQHRQEAVKKGKDPYSDPVYANSEAGKKAKKIKDQQEAEAKAKAEQQKKDTEA
LQKYLEQKEKAYARELEAEAALARKRKENENQRIEATKKRQELNKDEWAAVQKALGEKER
DPHRNDLYKTTGTYYPEMNRRERLSATPSEADELAKMRAEDINNRRLARESAEKKRQAQA
EEKAELDRMKAQEINNNRLARERLEREQQLTNARLDNEKRVQAEIKQNEDRIKKNRADAQ
SGFTKYFNLQDKLGKFTRDINFLSGKEVSETKMHQLLEEMEKIRRKALDIGATDIASKLT
KNMLSGVKVVTEAEKEAAREKKKADNEAQKRLKEQAKLIEDIAKLWKDIEKYRGADGQSL
SKKGYDNMLGRISNLRDRAVEQGLHGDATLLNPSLLNGVNTKLGQFNNRLSEAKDKAQQL
YMRFRETGKEADKLNFLKAKADLKEMNNLAEDFDRAISKARRHELTLGNIAKRARESANW
QIGGRIENTVVDFPSEVISSVSKYELAMAGIAQVLPKVEEGQSAANAQFGKFADIAARYG
QSLDSALESAKSIGRMYGQADGNHNKGAENTSLLTAQAMKMATVDNFDPIEATRGLESAL
SQFNLQTEDTNLLMERSGKILDVWTKLAHNSGASAQDLVQGVNQAGAAAHQCGVSFETLN
SLVAVGIRSTGKTGNEIGTTLKSMFSSILSDKNIKSMEQFGVRVYDIGENGSRKLRDMKD
IILDISRVLSTGGKDAKELRDFMMPIAGGKQQYSKIDAILANYKELQRTMGEASDSAGFT
DKQLELQLNTISRKWETLKTNVSHWFANSGADGLANDLKWILDTLNRIVNAVMDADTHFY
QWAKLGVQIVIAWKAIPALINMAARAAGRFAAASTFKGGASAGVASLGSGLATQFSAAKY
GEMRKQLQAGNVQIAKANSLMTIWNGLMTKGARASSVAAFGVKLFSGAIGTLRGIVAALG
GPMGLAITAAMLLSEQFIASANDAEVLKEKQEDIIQKSEEVATTTALELEKHDEAAKKAQ
ELADQYNMLVDSLNALKAADDGSAESAQRQADVRKQMGAISDEVQQILHANAIEFDKDGK
INKDTIESLAEADKAKTIEKIDNAQSEITAEKDRLDAKIESAKIILEAQKAEINSTYAVA
TAYKALYATVTALEGLMAGFDFGMQGALESTMIGGASRFVFGDAKTDEWIASFKSSAQSH
AQNFANRLDFLSSGKNILALQNVIEQQKIIDSLQPQVDRLSDRWNSLEAVKRGVGYDQDK
HEYYEKREDIDTSGRIPGGGKEHPLSEAEKKAAAKEAAKAKREAAKAAREQAKLERQKEI
VSFRNDEPMDYVNTVSKETGALTIGQLLSFAAALNGHNDPWKVHADYFSDKNIFKVPEAL
TNQYADGKTDEESRFWAFSKWLQNNQARFGGYEGALEAYYKTIHPQTSDEELKRKAEAWM
NEGEYFDSKHDYNKNKSVLTHHSAYGTGYASGDVITGSQYDDYINRMAERYGVDKVLAHQ
IAERESTHGQYSSNVMQVESATGREMGFSDMSDPFQSIEAGLKYFAKMLNDNNGNIEAAL
RAYNGGGDPNYVENVLKHKYTPVGVTGNSSIWDKAAEHLSDQGLLDYGAGAENLGLQCAA
FVSKVLVEAGVKGLNSINVDELARQADAQGLYHSADSGYQPQKGDIYIWGHHTGFADGQG
NYIARNSTEGVHFGNELDYRANFGGLRGYISTGSALGGSSKQAAFQWKNSESDGQPTLLN
WRPNQQNVVQNWYERQQDLFKLQEQEVKMLEDAGQMAESIKEQSQTARDKANTQATYLAI
TKRNVLEAYKLFIKKMSEDSDVQAALKRNGTTITNISPSDMDDLIQRMKNAKKNTEELER
LWKVVKEFKFDSNGNSTKLQEIDLNEKQQRIEAAKASGYMTPQEEEDYALNSLDLWYQQE
SSGKIFQDPRMEEEYHRQRATVYQTRLERLQVEAEKADEDAPAVKEELRQKVLAAKNNVD
SKEAALHNASTPEEIAKAKKELDEAQNALDLQSETWRNVEQHGTDAQRKIAQETSKTIAN
LNKETKAADKVGTEIKQKIGNGIKTMFSDVLIEGNNFKDAWKNLWTDIGKFALDRLLEIQ
MSKWFTPIGKATGGSVKAGATGGMVTNLSGIARFANGGYTYTNGLIQGAGTGTSDSILTY
LAHRGQFIATSNGEYIIKKSSVDKLGVGFLDTLNNNPEAIGALNGLKRYANGGNLGESYA
PSMSLKGINGYKTFNKSNMEKQMSFSTRKMETLLQGLRQDVQDGNKSDGSVAQPIILNTQ
ADSASVMKAIAKNPRALQAILGNNQRRGFR
NT seq
7473 nt
NT seq
+upstream
nt +downstream
nt
ttggataaaaaccaagaactacggacaaatctcgtgcttgaggccaactctgcattaacc
gcaatcagagagctttccgatgggctggacaaaatcagcaaattgaagtttgataacgta
aaaagcggtttcgattcgctgaccaaggcttttcaggcggctcagaaaatgtcctctaag
gtggctaagactcaggtaaaagaggaagaagaactgcagaacttaatgcaaaagcgaaag
aaaattatcgctgacatgatgaaccagttttcaaaagaaaagactggcttatctgtaaag
gtcgatatgtctgccgctcaaaaggaactgcagaaaaccacccgcatggttgccgatatg
tacgatgcactggggcaaacgggaaaagctaaaaccctgatgggcgaggctcttaatgtt
ctcgcgaaactcagtaatgggggagcgaaagggataggtctagagtctgcaaaaagagaa
tacaaggactttgagcgacaactccaagaaaacaaggccatgagggctgaactcgatcga
caggtagccaacggcatagccgaacaacaccgccaagaagctgtgaaaaaagggaaagac
ccgtattccgacccggtttatgcaaattctgaggctggcaaaaaggcaaaaaaaataaaa
gaccagcaagaggccgaggccaaggccaaggcggagcagcagaaaaaagatactgaagct
ctgcagaaatacctcgaacaaaaagaaaaggcgtatgcaagagagctggaagcagaagct
gcgctggctcgaaaacgcaaagaaaatgaaaaccaacggattgaggccaccaaaaaacgc
caagagctaaacaaggatgagtgggctgctgtccaaaaggctctcggggaaaaggaacgt
gacccacaccgtaacgacctctacaaaaccactggcacatattatcccgaaatgaatcgc
agggaacggttatcggctactccgtccgaagcggatgagttagctaaaatgcgagcggag
gacatcaataatcgtcgtttggccagagaatcggctgagaaaaaacgtcaggcacaagcc
gaggaaaaggctgagcttgacagaatgaaagcccaagagattaacaacaatcgactggct
cgggagcgactggaacgagagcaacaacttaccaatgctaggttagataatgagaaacgt
gttcaagctgaaataaagcaaaatgaagaccgcatcaaaaagaaccgcgcagatgctcaa
agcggttttacgaaatattttaaccttcaggataagctgggtaaatttacgagagatata
aacttccttagcgggaaagaagtttccgaaacgaaaatgcaccaactcctcgaggaaatg
gaaaaaattaggcgcaaggcgcttgatattggtgccacggatattgccagcaagctgacc
aaaaacatgctgagtggcgttaaggtagttactgaggccgaaaaagaggcagctagagag
aaaaagaaagctgacaatgaagctcagaaacgccttaaagagcaagcaaaactcatagaa
gatattgcaaagctctggaaggacattgaaaaataccgaggcgcagatggccagagtttg
tctaaaaagggctatgacaatatgctgggcagaattagcaacctgcgtgacagggcagtg
gagcaaggtttacatggcgatgcaacattactgaacccttccctgctgaacggcgtaaac
acaaagctggggcagtttaataatcgcctgtccgaagcgaaagacaaagcgcaacagctc
tatatgaggtttcgagaaactggcaaagaggccgacaaattgaacttcttgaaagccaag
gcagacctcaaagaaatgaacaacctcgctgaggattttgatcgagccatcagcaaggct
agacggcatgagctgacgctggggaatattgctaaaagggcgcgagagtctgctaactgg
caaatcggtggccgaatcgaaaacaccgtcgttgattttccgagcgaagttatctcgtct
gttagtaaatatgagctggctatggctggtattgcacaggtgttgccaaaagttgaagaa
gggcagtctgctgctaacgctcaattcggtaaatttgcagatattgccgctcgttatggg
cagtctctcgatagtgctctcgaatcggcaaaatcaataggtagaatgtatggtcaggcc
gacggaaaccacaacaaaggagcagagaatacctctcttttgaccgcacaagcaatgaaa
atggcaacggtcgacaactttgaccccattgaagctactcgcggtctcgagtctgcgtta
tcacagtttaacttacagaccgaggacactaaccttttgatggaacgctcgggaaaaatc
cttgacgtttggacaaagctggcacacaattcgggtgcttctgctcaggatttggttcaa
ggtgtaaaccaagcaggcgcggctgctcatcagtgtggtgtgtctttcgagacactgaac
tcgctcgtggctgtgggtattcgctccactggcaagacaggcaacgagataggcacgact
ctaaaaagtatgttctcttctatcctttccgataagaacatcaaaagcatggagcagttt
ggcgttagagtgtacgacattggagaaaacggtagcagaaaacttcgagatatgaaggat
attattctggatatttctcgcgttctaagtactggcggcaaagacgccaaagaactccgt
gactttatgatgcctattgctggtggtaaacagcagtattcaaaaatcgatgctattctt
gcgaactacaaagagttacagcgtaccatgggagaagctagtgactctgcaggttttacg
gataagcagttggaacttcagctcaatacaatttctcgtaagtgggaaaccctaaaaact
aatgtctctcactggtttgctaatagcggcgcggatgggttggccaacgatctgaagtgg
attctcgatacgctaaatagaattgtaaatgccgttatggacgcagatactcatttttat
caatgggcaaagttgggagttcaaattgttatcgcgtggaaagctatccctgctcttata
aacatggcggctcgtgcggctggacgctttgcagctgctagtacgtttaagggtggagcc
tctgctggagttgcttcgttaggcagtgggttagcaacacaatttagcgcagcaaagtat
ggcgagatgagaaagcaattacaagcgggaaatgtccaaattgctaaggccaatagcctt
atgacaatatggaacggcttgatgaccaaaggtgctagggcatcttcggttgccgctttt
ggggtaaaattgttttccggcgcgataggtactcttcggggaatagttgccgcgttaggc
ggccctatggggctggcgattacggctgcgatgttactaagtgaacagttcatagcaagt
gctaacgatgcggaggttttaaaagagaagcaggaagatataattcaaaaatctgaagaa
gtggctaccaccaccgctctagagctggagaagcacgatgaagccgcaaaaaaagcgcaa
gagctcgcagaccaatacaatatgctggttgattctttgaacgctttaaaagccgctgat
gacggttctgctgagtctgcacaacggcaagcagacgttcgtaaacaaatgggggcgatt
agtgacgaggttcaacaaatactccatgccaacgctattgagttcgacaaagacggaaaa
ataaacaaagacaccattgagagcctagctgaagccgataaggctaaaacgatagagaaa
atagataatgctcagtctgaaataacagcagaaaaagaccgccttgatgctaaaatcgaa
tcagcaaagatcatcttggaggctcaaaaggctgaaatcaacagtacctatgccgttgcg
actgcatataaagctctgtacgccaccgttactgcccttgaagggttgatggctggtttt
gatttcgggatgcaaggagctctggagtctaccatgattggtggagcttctcgttttgtt
ttcggtgatgctaaaacagatgaatggattgcgtcttttaaaagctccgctcaatctcat
gctcaaaactttgctaataggttggattttttaagctctggcaaaaatattcttgctctg
caaaatgtaattgaacaacagaaaattatagacagtctccaacctcaagttgaccgttta
agtgacaggtggaatagtcttgaggccgtaaagcgtggagtcggatatgaccaagataaa
catgagtattatgagaaaagggaagatatagacacttccggcagaatccccggtggaggc
aaagagcatcctctgtcagaagcagagaagaaggctgctgccaaagaagccgctaaggcc
aaacgcgaggctgcaaaagctgctagagaacaggctaaacttgaacgacagaaagagatt
gtctctttccgtaatgacgagcctatggactatgtaaatactgtgtctaaagaaactggc
gctcttactatcggtcagttactgtcgtttgcggcggctcttaatggtcataacgacccg
tggaaggttcatgcggactatttctccgataagaatattttcaaggttcccgaggcactg
acaaaccaatatgccgatggaaagaccgatgaggagtctcgtttttgggcgttctctaaa
tggttacagaataaccaggcgcgatttggcggatatgaaggggcacttgaggcttattac
aaaactatccatccgcaaaccagtgatgaggaactgaagcgtaaggcagaggcgtggatg
aacgagggcgagtatttcgactccaaacacgattacaacaaaaacaaatctgtgctgact
catcatagtgcctatggtactggctatgcaagcggggacgttattactggctcccagtat
gacgattatattaaccgcatggccgagcggtatggtgtcgataaggtgctggctcatcaa
atcgcagaacgagaatcaacgcatggtcaatattccagtaatgtaatgcaggttgaatcc
gcgacaggtagagaaatgggcttctccgatatgagtgaccctttccagtctatcgaggcc
ggactcaaatattttgcgaagatgttaaacgacaacaacggcaacatcgaagcggcgctt
agggcgtacaatggcggcggagacccgaactatgttgaaaatgttttgaagcacaaatat
actcctgtaggtgtaacaggcaatagttctatttgggataaggcggcagaacatcttagc
gaccaaggacttttggactacggagccggggcagaaaacctcggtctgcaatgcgctgcc
tttgtttccaaggtgcttgtagaggccggggtaaaaggacttaactctatcaatgtagac
gaattggccagacaggctgatgcgcaggggctttatcattcggcagacagtggctaccaa
ccacaaaagggcgatatttacatttggggacatcacactggatttgctgatggacaaggt
aactatatagcccgtaactccactgagggggttcacttcgggaatgagcttgactaccgg
gcaaattttggcggtcttaggggatatatctccactggctctgcacttggtggcagcagc
aagcaagcggctttccaatggaaaaatagcgagtcggatggacagcctactttattgaat
tggagaccaaaccagcaaaatgttgtacagaattggtatgaacgccagcaagacctgttt
aaacttcaagaacaagaagtaaaaatgctagaagatgctggtcaaatggccgagtcaatc
aaagagcagtctcaaacggctagagacaaagctaatacgcaggctacttatcttgcgatt
acaaagcggaatgtgctagaagcctataaactgttcattaagaaaatgtctgaggacagt
gatgtacaggctgcgttgaagcggaatggcacgaccattaccaatatttctccttccgat
atggatgaccttatccagcgcatgaaaaatgccaaaaagaacaccgaggagctggagcga
ttgtggaaggttgtcaaagagtttaagttcgactctaacggcaacagtacaaagctacaa
gaaattgacctcaacgaaaagcaacagcgaatcgaagcggcaaaagcatccgggtatatg
acaccccaagaggaagaagattatgctctgaactcgttggacttgtggtatcagcaagaa
tccagcggcaaaatattccaagaccctcgcatggaagaggaatatcacagacaaagagcc
actgtttatcagacacggctggaacgtctgcaggtagaagctgaaaaggctgacgaggat
gccccagctgtcaaggaggaattacgtcaaaaggtattagctgccaagaacaatgttgac
agtaaagaagccgctctccataacgccagtacgccagaggaaatcgcaaaggccaaaaag
gaacttgacgaagcgcaaaatgcacttgacctgcagagcgaaacgtggcgaaatgttgag
caacacggcaccgatgcgcagcgcaaaattgcgcaggaaacgtcaaagacaatagccaac
ctaaacaaagaaactaaggccgccgacaaagtgggtacggagataaagcagaaaattggt
aatggtataaaaaccatgttctccgatgtgcttatcgagggtaataacttcaaggacgca
tggaaaaacctttggacagatataggcaagtttgcacttgaccgtctgttggaaatccaa
atgtcgaaatggttcaccccaatcggcaaagccacaggtggctctgttaaggctggtgcc
actggtggcatggttactaatctctccggcattgctcgttttgccaacggtggttatact
tatacaaatggcctgatccaaggggcagggacagggacttccgacagtatcctgacatac
cttgcgcacagaggacagttcatcgctacctccaacggcgaatacatcatcaaaaaatcc
tcggtagacaagctgggtgttggtttcctcgacacgttgaacaataaccctgaagcaatc
ggggcattgaacggccttaaacgatacgccaacggcggcaacctcggggagtcttatgcg
ccttctatgagtctgaaaggaatcaacggctataagaccttcaacaagtccaatatggaa
aagcaaatgagtttctctacccgaaaaatggaaacgcttctgcagggactccggcaagac
gtacaggatggcaacaagtctgatggttcggtcgcacagccgattatcctgaacacgcaa
gctgacagcgcatccgtgatgaaagctattgcaaagaacccgagagcattacaggccatc
ttggggaataaccagcgaagggggtttagataa
DBGET
integrated database retrieval system
