Streptomyces rimosus: CP984_06580
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Entry
CP984_06580 CDS
T07052
Name
(GenBank) helix-turn-helix transcriptional regulator
Organism
srim
Streptomyces rimosus
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_16
GerE
Sigma70_r4_2
HTH_23
AAA_22
BrxC_BrxD
ATPase_2
HTH_24
Motif
Other DBs
NCBI-ProteinID:
QEV74735
LinkDB
All DBs
Position
complement(1623592..1626537)
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AA seq
981 aa
AA seq
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MKLVERDTELSVLEGMLDACAAGRGGAALVSGAVGGGKTALLRAFRERAAPAGAVWLQAT
ATAADKDVPLRVVGQLLRTAGSPGADGEPAVWPLTSPVAGGVPVRGADGAVPAEVVADVF
PRLCGILFARARKRPVVVCVDDVHLADAYSVECLLHVVRRLDVSRILVVLGESSGSEWDD
SRTRRELLRRPVCRFLHVGALPRDGIAAMLADGRKGRRSAPPVSEFHRLSGGSPLLMRAL
LDDYADADRAGGAELVPGEAYERAVALCLNRSDRLTRSTAWVLAVLGPRGERAEPAELLG
VPRAAGERSLRALHDMGLLAAGRFRHEAGRTAVLRRVEPPRSPRLEARVARVLYEYGASS
TVLARHLVAAENVDAPWVLPALLEAAEAALARNEVGRALDCLRVARDSCADERQVLRVRI
ALVRAGWRVDPSAAVRYLPALTDAALAGRLTPRDMKALIGHLLWFGRADEALEVLRVVEG
LGEREGLEEKEELGEVAEGAVAPGRWGVGGAGERQVVESARLWFAYGYPGVAARCGAAVA
PGPYGGVGAGGRIAGLVAECGTQQRALALMASVLDQGAAGDAVVRAERILQETRPEDRTP
AAGLAALVALIVADGLPEASRWCDILLAEARERRAPMWQSLFATAKAYTEIRLGELAAAE
ESAHTALTVVPPEGWGAAVAAPVAALLYAKAAMGRLDEAAAHLRIPVPDAAFRTPGGLLY
LWARGHYHFAAGRPYAALEDFHRCGDLMARWRLDLSALVPWRSDAAQVYVSLGDDRRARS
LLEEELTRPGPRPPWTRGVALRVLAALAERADRPRLLAEALDILQRSGHRLELAYAMAEL
SYSYWDRNEDGRARVAARKAQQLMRECGIKAPVLKASPVGAASACPPERPERPGAGRSAT
GLSGAELRVAALAARGYTNRQIAGALFITISTVEQHLTRAYRKLGVQRRTDLATRLNLDA
EEGTGAAGCGDGLSRDCLRAG
NT seq
2946 nt
NT seq
+upstream
nt +downstream
nt
atgaagttggtggaacgggacacggagctctccgtcctggagggcatgctcgatgcctgt
gcggccgggcgtggtggggcggcgttggtcagcggtgcggtgggcggcgggaagacggcg
ctgctgcgcgcgttccgggagcgggcggcgccggccggtgcggtgtggttgcaggccacg
gcgaccgcggcggacaaggacgtgccgctgcgcgtggtggggcagctgctgcggaccgcc
gggtcgcccggcgcggacggggagccggcggtgtggccgctgacgtcgccggtcgcgggc
ggcgtgccggtgcggggcgccgacggcgccgttcccgcggaggtggtcgcggacgtgttt
ccgcggctgtgcggaatcctcttcgcccgggccaggaaacggccggtggtggtgtgcgtc
gatgacgtgcatctggccgacgcctattccgtggaatgtctgctgcatgtcgtgcgacgg
ctggatgtcagcaggattctggtggttctcggggaaagcagcggttcggagtgggacgac
agtcgtacgcggcgggaattgctgcggcggccggtatgccgttttctgcatgtcggtgcg
ctgccgcgggacggtatcgccgccatgctggccgacgggcggaaagggcggcgttcggcg
ccgcccgtatcggaattccaccggctgagcggtggcagtccgctgctgatgcgggcgctg
ctggacgattacgcggacgcggaccgcgccggaggtgccgagttggtgcccggcgaggcg
tacgaacgcgccgtcgcgctgtgcctgaaccgcagtgatcgcctcacccgcagcacggcc
tgggtgctggcggtgctcgggccgcgcggcgaacgggccgagcccgcagagctgctcggg
gtcccgcgcgcggcgggcgaacgcagcctgcgcgccctgcacgacatggggctgctggcc
gccggccggttccgtcacgaggcggggcggacggcggtgctgcgccgggtggagccgccg
cgctcgccgcgcctggaggcccgcgtcgcccgggtcctgtacgagtacggggcgtcgtcg
accgtactggcccgccatctggttgccgcggagaacgtggacgccccctgggtgctgccc
gccctcctggaggcggccgaggcggcactggctcgtaacgaagtggggcgggcgctggac
tgcctgcgcgtggcccgggacagttgcgcggacgagcggcaggtgctcagggtgcggatc
gcgctggtacgggccgggtggcgggtggatccgtccgccgccgtacggtacctgcccgcc
ctcaccgacgccgcgctggccgggcgcctgactccccgggacatgaaggcgctgatcggc
catctgctgtggttcggcagggcggatgaggcgctggaggtgcttcgggtggtggagggg
ttgggggagagggaggggctggaggagaaggaggagctgggggaggttgcggagggggct
gtggcccctgggcggtggggagttggtggggcgggggagcggcaggtggtggagtcggcc
cggctctggttcgcctatgggtaccccggggtggcggcccggtgcggggccgcggtggcc
ccggggccgtacggaggcgtgggggccggtggccggatcgcgggtctggtggccgagtgc
ggtacgcagcagcgggccctcgccctgatggcttccgtactggaccagggtgcggccggg
gacgcggtcgtccgtgcggaacggattctccaggagacccggccggaggaccggaccccg
gcggcggggctggcggccctggtggccctcatcgtcgccgacgggctgccggaggcttcc
cggtggtgcgacatcctgctggcggaggcgcgtgagcggcgggcgccgatgtggcagtcg
ctgttcgccacggccaaggcgtacaccgagatcagactcggcgagctggccgcggcggag
gagtcggcgcacaccgcgctgaccgtcgtcccgcccgaagggtggggagcggccgtcgcg
gctccggttgccgcgctcctgtatgcgaaggctgccatggggcggctggacgaggccgcg
gcgcacctgaggattcccgtgcccgacgcggcgttccggacgcccggcgggctgctgtac
ctctgggcgcgcggccattaccacttcgccgcgggccgcccgtacgccgcgctggaggac
ttccaccggtgcggggacctgatggcgcgctggcgtctcgacctgtccgcgctggtgccg
tggcgctccgacgccgcgcaggtgtacgtctcgctgggggacgaccgccgcgcccggtcc
ctcctggaggaggaactgacccgtcccggcccccggccgccgtggacgcgcggggtcgcg
ctgcgggtgctggcggcgctggccgagcgcgcggaccgcccgcggctcctcgccgaggcc
ctggacatcctccagcgcagcggccaccggctggagctggcgtacgcgatggcggaactg
tcgtacagctactgggacaggaacgaggacggccgggcccgggtggcggcgcgcaaggcg
cagcagctgatgcgggagtgcggcatcaaggcgcccgtcctgaaggcgtcgccggtcggc
gcggcgagcgcctgcccgcccgagcggcccgagcggcccggggcggggcgttcggccacc
gggctgagcggcgcggaactgcgcgtcgcggcgctcgcggcgcgcgggtacaccaaccgg
cagatagccggggcgctgttcatcacgatcagtacggtggagcagcacctgacccgggcc
taccggaagctgggcgtgcagcgccgtacggacctggcgacccggctgaacctggacgcc
gaggaggggaccggggctgccgggtgcggcgacggcttatcgcgtgactgtctgcgggcc
ggttag
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