Streptomyces rimosus: CP984_08680
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Entry
CP984_08680 CDS
T07052
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
srim
Streptomyces rimosus
Brite
KEGG Orthology (KO) [BR:
srim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
srim03016
]
CP984_08680
Enzymes [BR:
srim01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
CP984_08680
Transfer RNA biogenesis [BR:
srim03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
CP984_08680
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
DNA_pol_A_exoN
HRDC
Motif
Other DBs
NCBI-ProteinID:
QEV75088
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All DBs
Position
2096559..2097833
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AA seq
424 aa
AA seq
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MTDAQKTAEDSTLRTPGDSPPDTRPAPVPLLEPREGTPPVTATAEELAEVVTAFAAGTGP
VAVDAERASGYRYGQRAYLVQLRREGAGSVLIDPVGCPDLSALGEAITDAEWVLHAATQD
LPCLRDIGMVPSRLFDTELAGRLAGFARVGLGAMVENVLGYALEKGHSAVDWSTRPLPEP
WLRYAALDVELLVDLRDALEDELSRQGKLEWAHQEFAAIAAAPPAPPRKDPWRRTSGMHK
VRRRRQMAVVRELWTTRDEVAQRRDISPGKVLGDAAIIEAALNLPPNTHALAALAGFGHR
MGRRQLEQWQAAVDRARALPESELPQPGQPLNGPPPPRSWADKDPAAAARLAAARTAVTA
LAEDLNLPQENLITPDTVRRLCWEPPAEPTKEAVAAVLAGHGARPWQIEQVTPILTEALT
STGA
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgacgcccaaaagaccgcagaagactcgacactgcgaacacccggagactcgcct
ccggacacccgcccggcgccggtccccctgctggaaccgcgcgagggcaccccgcccgtg
acggccacggccgaggaacttgccgaagtcgtgacggccttcgcggccggtaccggtccg
gtggcggtggacgccgaacgggcctccggctaccgctacggccagcgcgcctacctggtg
cagctgcgccgcgaaggcgccggcagcgtcctgatcgacccggtcggctgccccgacctc
tcggcgctgggcgaggcgatcaccgacgccgagtgggtgctgcacgccgccacccaggac
ctcccctgcctgcgcgacataggcatggtcccgtcccggctcttcgacaccgagctggcc
ggccgcctcgccggcttcgcccgcgtcggcctcggcgccatggtggagaacgtcctcggc
tacgccctggagaagggccactccgcggtcgactggtccacccgcccgctgccggaaccc
tggctgcgctacgccgcactcgacgtcgagctgctggtcgacctgcgcgacgccctggag
gacgagctgtcgcggcagggcaagctcgaatgggcgcaccaggagttcgcggccatcgcc
gccgcgcccccggcgccgccccgcaaggacccctggcgccgcacgtccggcatgcacaag
gtccgccgccgccggcagatggccgtcgtacgggaactgtggaccacccgtgacgaggtc
gcccagcgccgcgacatctcacccggcaaggtgctcggcgacgccgccatcatcgaagcg
gccctgaacctgccccccaacacccacgccctcgccgccctcgccggcttcggccaccgc
atgggccgccgccagctcgaacagtggcaggccgccgtggaccgcgcccgcgccctgccg
gaaagcgagctgccgcagcccggccagccgctgaacggccccccgccgccccgctcctgg
gccgacaaggacccggcggcggcggcccgcctggccgccgcccgtacggcggtgaccgcc
ctggccgaggacctgaacctcccccaggagaacctgatcacccccgacacggtgcgccgc
ctgtgctgggagccccccgccgagccgaccaaggaagccgtcgcggccgtcctggccggc
cacggcgcccgcccctggcagatcgaacaggtcaccccgatcctcaccgaggccctgacc
tcgaccggcgcctga
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