Streptomyces rimosus: CP984_09930
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Entry
CP984_09930 CDS
T07052
Name
(GenBank) DNA topoisomerase IV subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
srim
Streptomyces rimosus
Brite
KEGG Orthology (KO) [BR:
srim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
srim03032
]
CP984_09930
03400 DNA repair and recombination proteins [BR:
srim03400
]
CP984_09930
Enzymes [BR:
srim01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
CP984_09930
DNA replication proteins [BR:
srim03032
]
Prokaryotic type
DNA Topoisomerases
CP984_09930
DNA repair and recombination proteins [BR:
srim03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CP984_09930
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
FliT
SelB_WH2
Motif
Other DBs
NCBI-ProteinID:
QEV75298
LinkDB
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Position
2455824..2458271
Genome browser
AA seq
815 aa
AA seq
DB search
MARRSTKTPPPDDFEERILDIDVVDEMQGSFLEYAYSVIYSRALPDARDGLKPVHRRILY
QMNEMGLRPERSYVKCARVVGEVMGKLHPHGDASIYDALVRMAQPFSMRLPLVDGHGNFG
SLGNDDPPAAMRYTECKMASATSLMTESIDEDTVDFAPNYDGQEQEPVALPAAYPNLLVN
GASGIAVGMATNMPPHNLGEVIAAARHLIKHPNADLETLMRFVPGPDLPTGGRIVGLGGI
RDAYETGRGTFKIRATVSIENVTARRKGLVVTELPFAVGPEKVISKIKDLVGAKKLQGIA
DVKDLTDREHGLRLVIEIKNGFNPEAVLEQLYKLTAMEESFGINNVALVDGQPLTLGLKE
LLEVYVDHRFDVVRRRSEFRRGKKRDRLHLVEGLLTALVDIDEVIRLIRSSENSAQAKER
LIDRFGLSDVQTQYILDTPLRRLTKFDRIELESERDTLKADIEKLTKILDSDAELRKLVS
NELASVAKKYGTDRRTVLLESAGAPVAAVPLEVADDPCRVLLSSTGLLARTANGEVSFDA
EARRVKHDVIVSAVPATTRGEVGAVTSAGRLLRLQVVDLPQLPDTVAAPNLSGGAPVAEF
LSLQEGEELICLMTLDESSPGLALGTQQGIVKRVVPDYPSHKEELEVITLKDGDRIVGAA
ELRTGEEDLVFITNEAQLLRYPAGQVRPQGRPAGGMTGIKLGPDAKVIFFSAVDPAADAM
VFTVSGSHGTLDDSVSTAKLTPFDQYPRKGRATGGVRCQRFLKGEDCLSLAWAGATPVRA
ADAKGSPVPLPDPDPRRDGSGVPLQKPVAALAGPV
NT seq
2448 nt
NT seq
+upstream
nt +downstream
nt
atggcccgccgtagcacgaagaccccgccgccggacgacttcgaggagaggatcctcgac
atcgacgtcgtcgacgagatgcagggctccttccttgagtacgcgtactcggtcatctac
tcccgcgccctcccggacgcccgcgacggcctcaagcccgtgcaccgccgcatcctctac
cagatgaacgagatggggctgcgccccgaacgcagctacgtcaagtgcgcccgcgtcgtc
ggcgaggtgatgggtaagctccacccgcacggcgacgcctccatctacgacgccctggtg
cggatggcgcagcccttctccatgcggctgcccctggtcgacggccacggcaacttcggc
tcgctcggcaacgacgacccgcccgccgccatgcggtacaccgagtgcaagatggcctcg
gccacctccctgatgacggagtccatcgacgaggacacggtcgacttcgcgccgaactac
gacggccaggagcaggagcccgtcgccctcccggcggcctacccgaacctgctggtcaac
ggcgcgtccggaatcgccgtcggcatggcgacgaacatgccgccgcacaacctcggcgag
gtgatcgccgccgcccgccacctgatcaagcacccgaacgcggacctcgaaacgctgatg
cggttcgtgccgggccccgacctgccgaccggcggccggatcgtgggcctgggcggcatc
cgggacgcgtacgagaccggccgcggcaccttcaagatccgcgccaccgtctcgatcgag
aacgtcaccgcccgccgcaagggcctggtcgtcaccgaactgccgttcgcagtgggcccc
gagaaggtcatctccaagatcaaggacctggtgggcgcgaagaagctccagggcatcgcg
gacgtgaaggacctcaccgaccgcgagcacggcctgcgcctggtcatcgagatcaagaac
ggcttcaacccggaagccgtcctggagcagctgtacaagctcacggccatggaggagtcc
ttcggcatcaacaacgtcgcgctggtcgacggccagccgctgacgctgggcctgaaggag
ctgctggaggtctacgtcgaccaccgcttcgacgtggtgcgccgccgcagcgagttccgg
cgcggcaagaagcgcgaccgcctccacctggtcgagggcctgctgacggccctggtcgac
atcgacgaggtcatccgcctgatccgctccagcgagaacagcgcgcaggccaaggagcgg
ctgatcgaccgcttcggcctcagcgacgtccagacgcagtacatcctcgacaccccgctg
cgccggctgaccaagttcgaccgcatcgagctggagtccgagcgcgacaccctcaaggcc
gacatcgagaagctgacgaagatcctcgactcggacgccgagctgcgcaagctggtctcg
aacgagctggcctcggtggccaagaagtacggcacggaccggcgcacggtcctgctggag
tcggcgggcgccccggtggcggcggtgccgctggaggtcgccgacgacccgtgccgggtg
ctgctgtcctcgacggggctgctggcccgtacggccaacggcgaggtgagcttcgacgcg
gaggccaggcgcgtcaagcacgacgtgatcgtctcggcggtgccggccaccacccgcggc
gaggtgggcgcggtgacgtccgccggccggctgctgcgcctccaggtggtcgacctgccg
cagctgccggacaccgtcgcggcgccgaacctctccggcggcgcgccggtcgcggaattc
ctctccctccaggagggcgaggagctgatctgcctgatgacgctcgacgagtcctcgccg
ggcctggcgctcggcacccagcagggcatcgtcaagcgcgtggtgccggactatccctcc
cacaaggaggagttggaggtcatcaccctcaaggacggcgaccgcatcgtgggcgccgcg
gagctgcgcacgggcgaggaggacctggtcttcatcaccaacgaggcgcagctgctgcgc
tatccggcggggcaggtgcggccgcagggccggccggccggcggcatgacgggcatcaag
ctgggcccggacgcgaaggtgatcttcttctcggccgtcgacccggccgccgacgccatg
gtcttcacggtctccggctcgcacggcacgctcgacgactcggtctcgacggccaagctc
acccccttcgaccagtacccgcgcaagggccgggcgaccggcggcgtgcgctgccagcgg
ttcctgaagggcgaggactgcctgtcgctggcctgggccggcgccacaccggtacgggcc
gcggacgccaagggctccccggtccccctgccggacccggacccgcggcgcgacggctcg
ggcgtaccgctgcagaagccggtcgcggcgctggcggggccggtgtag
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