Streptomyces rimosus: CP984_09990
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Entry
CP984_09990 CDS
T07052
Name
(GenBank) type IIA DNA topoisomerase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
srim
Streptomyces rimosus
Brite
KEGG Orthology (KO) [BR:
srim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
srim03032
]
CP984_09990
03400 DNA repair and recombination proteins [BR:
srim03400
]
CP984_09990
Enzymes [BR:
srim01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
CP984_09990
DNA replication proteins [BR:
srim03032
]
Prokaryotic type
DNA Topoisomerases
CP984_09990
DNA repair and recombination proteins [BR:
srim03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CP984_09990
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
Motif
Other DBs
NCBI-ProteinID:
QEV75308
LinkDB
All DBs
Position
complement(2470986..2473106)
Genome browser
AA seq
706 aa
AA seq
DB search
MTAEMSVPSTAVLTGADRDGSNYTARHLLVLEGLEAVRKRPGMYIGSTDSRGLMHCLWEI
IDNSVDEALGGYCDRIEVILHDDGSVEVRDNGRGIPVDVEPKTGLSGVEVVMTKLHAGGK
FGGGSYAASGGLHGVGASVVNALSARLDVEVDRNSKTHSISFRRGVPGIFTESGPDAPFD
PANGLLKGKRIPKTRTGTRVRYWADRQIFLKDAKLSLETLHARARQTAFLVPGLTLVVRD
ERGLEGEGVLEETFRYDGGISEFCEYLAQDKAVCDVLRLSGQGTFKETVPVLDERGHMTP
TEVTRELGVDVALRWGTGYDTTVRSFVNIIATPKGGTHVTGFERAVTKTVNEALRAAKLL
RVAEDDVVKDDAMEGLTAVVTVRLAEPQFEGQTKEVLGTSAASRIVAQVIAKELKAFLTS
TKRDAKQQARAVLDKVVAAARTRIAARQHKEAQRRKTALESSSLPAKLADCRSDDVERSE
LFIVEGDSALGTAKLARNSEFQALLPIRGKILNVQKASVSDMLKNAECGAIIQVIGAGSG
RTFDIDAARYGKVIFLADADVDGAHIRTLLLTLFQRYMRPMVEQGRVFSAVPPLHRVELI
QPKKGQDKYLYTYSDNELRQTLLELQRKNIRYKDSIQRYKGLGEMDADQLAETTMDPRHR
TLRRINIGELEAAEKVFDLLMGNEVAPRREFITSSAATLDRSRIDT
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgccgagatgtccgtgccgtccaccgcagtgctgaccggggcagaccgggacggt
tccaactacaccgcgcggcatctgctcgtcctggagggactggaggccgtccgcaagcgc
ccgggcatgtacatcggctcgacggacagccgcggtctgatgcactgcctgtgggagatc
atcgacaactccgtcgacgaggccctgggcggctactgcgaccgtatcgaggtgatcctc
cacgacgacggttcggtggaggtccgcgacaacggccgcggcatcccggtggacgtggag
cccaagaccggcctgtccggcgtcgaggtcgtgatgaccaagctgcacgccggcggcaag
ttcggcggcggctcgtacgcggcctccggcggtctgcacggcgtcggcgcctccgtggtc
aacgccctgtccgcccggctggacgtcgaggtcgaccgcaacagcaagacccactcgatc
agcttccgccgcggcgtgcccggcatcttcaccgaatccggccccgacgcccccttcgat
ccggccaacggcctgctcaagggcaagcgcatccccaagacccgcaccggcacgcgcgtg
cggtactgggcggaccggcagatcttcctcaaggacgccaagctctccctggagacgctg
cacgcccgcgcccgccagaccgccttcctggtgcccggcctgaccctggtcgtgcgcgac
gagcgcggcctggaaggcgagggcgtgctcgaggagaccttccgctacgacggcggcatc
agcgagttctgcgaatacctcgcccaggacaaggccgtgtgcgacgtcctgcgcctgtcc
ggccagggcaccttcaaagagaccgtgccggtcctggacgagcgcggccacatgacgccc
accgaggtcacccgggagctgggcgtggacgtggcgctgcgctggggcaccggctacgac
accaccgtgcgctccttcgtcaacatcatcgccacccccaagggcggcacccatgtgacc
ggcttcgagcgggcggtgaccaagacggtcaacgaggcgctgcgcgcggccaagctgctg
cgggtggccgaggacgacgtcgtcaaggacgacgccatggagggcctgaccgcggtcgtc
accgtgcgcctggcggagccgcagttcgaggggcagaccaaggaggtgctgggcacctcg
gccgcctcccgcatcgtcgcccaggtcatcgccaaggaactcaaggcgttcttgacctcc
accaagcgtgacgccaagcagcaggcccgcgcggtgctggacaaggtcgtcgcggcggcc
cgcacccgtatcgcggcccgccagcacaaggaggcccagcgccgcaagaccgccctggaa
tcgtcctcgctgccggcgaagctggccgactgccgcagcgacgatgtcgagcgcagcgag
ctgttcatcgtggagggcgactccgcgctgggcaccgcgaagctggcgcgcaactcggag
ttccaggcgctgctgccgatccgcggcaagatcttgaacgtgcagaaggcgtccgtctcg
gacatgctcaagaacgccgagtgcggcgcgatcatccaggtgataggggccggctcgggc
cgtaccttcgacatcgacgcggcccgctacggcaaggtcatcttcctggccgacgccgac
gtcgacggcgcccacatccgcaccctgctgctgaccctcttccagcgctacatgcgcccc
atggtcgaacagggccgggtcttctccgccgtgccgccgctgcaccgcgtcgagctgatc
cagcccaagaagggccaggacaagtacctgtacacctactcggacaacgagctgcgccag
accctgctggagctgcagcgcaagaacatccgctacaaggacagcatccagcgctacaag
ggcctgggcgagatggacgccgaccagctggccgagaccaccatggacccccgccaccgc
accctgcgccggatcaacatcggcgagctggaagccgccgagaaggtcttcgacctgctc
atgggcaatgaggtcgcgccccgccgcgaattcatcaccagctccgccgccacgctcgac
cgctcccgcatcgacacctga
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