Streptomyces rimosus: CP984_10385
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Entry
CP984_10385 CDS
T07052
Name
(GenBank) HAMP domain-containing protein
Organism
srim
Streptomyces rimosus
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAMP
HAMP_2
HATPase_c
Response_reg
HisKA
GAF_2
GAF
RNase_Y_N
Motif
Other DBs
NCBI-ProteinID:
QEV75376
LinkDB
All DBs
Position
complement(2570856..2576366)
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AA seq
1836 aa
AA seq
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MESGAAARGTSTRAKGGRSRSNGTTEVDTAALNRLLAALVSMRDGNFRKRLTVSGDGAMA
EIAAVFNEVADRNLHLTGELARVRRVVGREGKLTERLEAGACEGSWAAAIDASNALVDDL
VRPVSEVGRVLSAVSEGDLEQRMDLRSRGSDDSSAHPLRGEFLKVGRTVNGLVDQLSAFT
DEVTRVASEVGTEGKLGGQARVRGMSGSWKDLTESVNTMASRLTAQVRDIALVTTAVAKG
DLSRKVTVHVAGEMLELKNTVNTMVDQLSSFASEVTRVAREVGTEGELGGQAQVPGVAGV
WKDLTDSVNLMAGNLTAQVRGIAQVTTAVANGDLSQKVTVSARGEVAQLADTINTMTETL
RTFADEVTRVANEVGAEGQLGGQAQVPGAAGTWKDLTDSVNNAFRNLTGQVRDIAQVTTA
VANGDLSQKVTVDVAGEMLELKNTVNTMVDQLSSFGAEVTRVAREIGVEGELGGQAAVPG
AAGTWKDLTDSVNTAFRNLTGQVRNIAQVTTAVANGDLSQKVTVDVSGEMLQLKNTVNTM
VDQLSSFADQVTRMARDVGTEGRLGGQARVDGVSGTWKELTDSVNFMAGNLTSQVRQIAQ
VTTAVARGDLSQKIDVDARGEILELKNTINTMVDQLSAFAEQVTRVAREVGTDGRLGGQA
QVPGVAGVWRDLTDSVNGMAGNLTAQVRNIAQVATAVARGDLSQKIDVDARGEILELKNT
LNTMVDQLSNFAEQVTRVAREVGTEGILGGQAEVQGVSGTWKDLTQSVNFMANNLTSQVR
SIGEVTTAVARGDLSKKITVDAKGEILELVTTVNTMVDQLSLFAEQVTRVAREVGTEGQL
GGQARVPGVTGIWKDLSDNVNLMANNLTIQVRNISQVSAAVANGDLTKKVTVEARGEVAQ
LADTVNTMVTTLSSFADEVTRVAREVGTDGILGGQARVPGVAGTWKDLTESVNSMANNLT
GQVRNIAMVTTAIAKGDLTKKIDIDARGEILALKTTINTMVDQLSSFAEQVTRVAREVGT
DGQLGGQAQVRGVAGTWKDLTESVNEMAGNLTRQVRAIAAVAAAVTLGDHNVRIDVDAAG
EILELQDNVNTMIATLRETTLANEEQDWLKGNLARISGLMQGRRDLKDVATLIMSELSPA
VSAQHGAFFLAASPGDGREIGADGGEPGAYELRLMGSYGYSMGAMPTTFRPGETLIGTAA
AEKRTILVENVPSGYLKIASGLGEAPPANVIVLPVLFEDKVLGVIELASFQPFTQIQKDF
LSQIAEMIATSVNTISVNTKTEMLLKQSQELTEQLKERSGELESRQKALELSNSELEEKA
EQLRAQNRDIEVKNTEIEEARQVLEERAEQLAVSMRYKSEFLANMSHELRTPLNSLLILA
KLLADNAEGNLSPKQVEFAETIHGAGSDLLQLINDILDLSKVEAGKMDVSPTRIALVQLV
DYVEATFRPLTAEKGLDFSVRVSPELPATLHTDEQRLLQVLRNLLANAVKFTDSGAVELV
IRPAGDDVPTDIREHLLEHGALREADAGMIAFSVTDTGIGIASSKMRVIFEAFKQADGTT
SRKYGGTGLGLSISREIARLLGGEIHAASEPGRGSTFTLYLPHNPGGLPPQGYPQLVAGG
LAMDAEARDAELGRDAAEEAAQTGVAPSRGSGPEPRRRRRPAAGAGPRPELPSAPTPPAA
PQPVEESPQTPAEEPWIGNGQDLVSSGFDGGFHGEKVLIVDDDIRNVFALTSVLEQNGLS
VLYAENGREGIEVLEQHDDVVLVLMDIMMPEMDGYATTAAIRRMPQFAGLPIIALTAKAM
KGDREKSIESGASDYVTKPVDTDHLLTVMEQWMRTR
NT seq
5511 nt
NT seq
+upstream
nt +downstream
nt
gtggagtctggcgcagcggcgcggggcacgagcacgcgcgcgaaaggcggacgttcccgg
agcaacgggacgactgaggtggatacggctgcgctgaaccggctgctggctgctctcgtc
tcgatgcgcgacgggaatttccgtaagcggctgacggtctccggcgacggagcgatggcg
gagatcgccgctgttttcaacgaggtggcggaccgcaatctgcacctcacgggagagctg
gcgcgggtgcgccgggtcgtgggacgtgagggaaaactcacggaacgcctggaggccggc
gcctgcgagggctcctgggccgcggccatcgacgcctcgaacgccctggtcgacgatctc
gtacggccggtgtccgaggtgggccgggtgctctccgcggtgtccgagggcgacctggaa
cagcggatggacctgcgctcgcgcggttcggacgacagttcggcgcatccgctgcgcggt
gagttcctgaaggtgggccgtacggtcaacggcctggtggaccagctgtcggccttcacc
gacgaggtgacgcgggtcgccagcgaggtcggtacggagggcaagctcggcgggcaggcg
cgggtgcgcggcatgtccgggtcctggaaggacctgaccgagtcggtcaacacgatggcg
tcccggctgaccgcgcaggtacgtgacatcgctctcgtcaccaccgccgtcgccaagggc
gatctgtcacgcaaggtgaccgtccatgtcgccggcgagatgctggagctgaagaacacc
gtcaacacgatggtggaccagctctcgtcgttcgcctccgaggtgacgcgcgtcgcccgc
gaggtcggtacggaaggcgagctgggcggccaggcgcaggtgccgggcgtcgcgggcgtc
tggaaggacctcaccgactccgtcaacctgatggccgggaatctcacggcgcaggtgcgc
ggaatcgcccaggtgaccacggcggtggccaacggcgatctgtcccagaaggtgacggtc
agcgcgcgcggcgaggtcgcgcagctcgccgacacgatcaacacgatgaccgagacgctg
cgtaccttcgcggacgaggtcacccgggtcgccaacgaggtcggcgccgagggccagctc
ggcgggcaggcccaggtgccgggcgcggcgggcacctggaaggacctcaccgactcggtg
aacaacgccttccgcaacctgaccgggcaggtccgcgacatcgcccaggtgacgacggcg
gtggccaacggtgacctgtcgcagaaggtcacggtcgacgtcgcgggcgagatgctcgaa
ctgaagaacaccgtgaacacgatggtggaccagctgtcgtcgttcggcgccgaggtgacg
cgcgtcgcgcgggagatcggcgtcgagggtgagctgggcggccaggcggcggttccgggc
gctgccggtacgtggaaggacctgaccgactccgtcaacacggccttccgcaacctgacc
ggacaggtgcgcaacatcgcgcaggtgacgacggcggtggccaacggtgacctgtcgcag
aaggtcacggtcgacgtctccggcgagatgctccagctgaagaacaccgtgaacacgatg
gtcgaccagctgtcctcgttcgcggaccaggtcacccggatggcgcgggacgtgggcacg
gagggccggctcggcggtcaggcccgggtggacggcgtcagcggtacgtggaaggaactg
accgactccgtcaacttcatggcgggcaacctcacgtcccaggtgcggcagatcgcccag
gtgacgacggcggtggcgcgcggcgacctgtcgcagaagatcgacgtggacgcgcggggc
gagatcctggagctgaagaacaccatcaacacgatggtcgaccagctctcggccttcgcg
gagcaggtcacccgggtggcccgcgaggtgggtacggacggcaggctcggcggccaggcc
caggtgccgggcgtcgcgggcgtctggcgcgacctgaccgactcggtgaacggcatggcc
ggcaacctgaccgcgcaggtccgcaacatcgcgcaggtcgcgacggcggtcgcgcgcggc
gacctgtcgcagaagatcgacgtggatgcccggggcgagatcctggagctgaagaacacc
ctgaacaccatggtggaccagctctcgaacttcgccgagcaggtcacccgggtggcgcgc
gaggtgggcaccgagggcatcctcgggggccaggccgaggtccagggcgtcagcggtaca
tggaaggacctcacccagtccgtcaacttcatggcgaacaacctcacctctcaggtgcgc
agcatcggcgaggtgaccaccgcggtcgcgcgcggcgacctctcgaagaagatcaccgtc
gacgccaagggcgagatcctcgaactggtcacgaccgtgaacacgatggtcgaccagctg
tcgctgttcgccgagcaggtgacgcgcgtcgcccgtgaggtcggtacggaaggccagctg
ggcggccaggcccgggtcccgggcgtcaccggcatctggaaggacctcagcgacaacgtc
aacctgatggccaacaacctgaccatccaggtgcgcaacatctcccaggtctcggcggcg
gtcgccaacggcgacctgaccaagaaggtcacggtcgaggcgcgcggcgaggtcgcgcag
ctcgccgacaccgtcaacacgatggtcacgaccctgtcgtcgttcgccgacgaggtcacc
cgggtggcccgtgaggtgggcaccgacggcatcctgggcggccaggcccgcgtacccggc
gtcgccggtacgtggaaggacctcaccgagtccgtgaactcgatggccaacaacctgacc
ggccaggtccgcaacatcgccatggtcaccaccgccatcgccaagggtgacctcaccaag
aagatcgacatcgacgcgcggggcgagatcctggccctgaagacgaccatcaacacgatg
gtcgaccagctctcctccttcgccgagcaggtcaccagggtggcccgtgaggtgggtacg
gacggccagctcggcggccaggcgcaggtgcgcggcgtggccggcacctggaaggacctg
acggagtcggtgaacgagatggcgggcaacctgacccgccaggtgcgggcgatcgccgcc
gtcgccgccgcggtgaccctcggcgaccacaacgtgcggatcgacgtggacgcggcgggc
gagatcctggagctccaggacaacgtcaacacgatgatcgccacgctccgcgaaaccacc
ctcgccaacgaggagcaggactggctcaagggcaacctggcccgtatctccggcctgatg
caggggcgccgcgacctgaaggacgtggccacgctcatcatgagcgagctgtccccggcg
gtctcggcccagcacggcgcgttcttcctcgccgcgtcccccggcgacggccgggagatc
ggggcggacggcggcgagccgggcgcctacgagctgcggctgatgggctcgtacggctac
tccatgggcgccatgccgacgacgttccggccgggggagaccctgatcggcacggcggcg
gccgagaagcgcacgatcctggtggagaacgtgccctccggctatctgaagatcgcctcc
gggctcggcgaggccccgccggccaatgtgatcgtgctgccggtgctcttcgaggacaag
gtgctcggcgtgatcgagctggcctccttccagccgttcacccagatccagaaggacttc
ctcagccagatcgcggagatgatcgcgaccagcgtcaacaccatctccgtcaacaccaag
accgagatgctgctcaagcagtcgcaggagctgaccgagcaactcaaggagcgctcgggc
gaattggagagccgccagaaggcgctggagctgtccaactccgagctggaggagaaggcc
gagcaactgcgcgcgcagaaccgcgacatcgaggtgaagaacaccgagatcgaggaggcg
cggcaggtcctggaggagcgcgccgaacagctggccgtctcgatgcgctacaagtcggaa
ttcctggcgaacatgtcgcacgagctgcgcaccccgctcaactcgctgctgatcctcgcc
aagttgctcgccgacaacgccgagggcaacctctccccgaagcaggtcgagttcgccgag
accatccacggcgccggttccgacctgctccagctgatcaacgacatcctggacctgtcg
aaggtcgaggccggcaagatggacgtcagcccgacgcgtatcgcgctggtccagctcgtc
gactacgtggaggccaccttccggccgctgaccgcggagaagggcctggacttctccgta
cgggtctcccccgagctgcccgccacgctgcacaccgacgagcagcggctgctccaggtg
ctgcgcaatctgctggccaacgcggtgaagttcaccgacagcggcgccgtggagctggtc
atccggccggccggcgacgacgtgccgacggacatccgcgaacatctgctggagcacggc
gcgctgcgcgaggcggacgccggcatgatcgcgttctcggtgaccgacaccggcatcggc
atcgcctccagcaagatgcgggtgatcttcgaggcgttcaagcaggcggacggcacgacc
agccgcaagtacggcggcaccggcctcggcctgtccatcagccgggagatcgcgcggctg
ctcggcggcgagatccacgccgccagtgagccgggccgcggctccaccttcacgctctac
ctgccgcacaaccccggcgggctgccgccgcaggggtacccgcagctggtcgcgggcggg
ctcgcgatggacgccgaggcgcgggacgcggagctcggccgggacgccgccgaggaggcc
gcgcagacgggcgtcgcgccctcccggggcagcggaccggagccccggcggcgccggcgc
ccggcggccggtgcggggccgcggccggagctgccgtccgcgcccacgccgccggcggca
ccgcagccggtcgaggagtccccgcagacgcccgccgaggagccctggatcggcaacggc
caggacctggtgtcgtccggcttcgacggcggcttccacggcgagaaggtgctgatcgtc
gacgacgacatccgcaacgtcttcgcgctcaccagcgtgctggagcagaacggcctgtcc
gtgctgtacgcggagaacgggcgggagggcatcgaggtcctggagcagcacgacgacgtg
gtgctggtcctgatggacatcatgatgccggagatggacggctacgcgaccacggccgcc
atccggcgcatgccgcagttcgccgggctgccgatcatcgcgctgaccgcgaaggcgatg
aagggcgaccgggagaagagcatcgagtccggcgcgtccgactacgtgaccaagccggtg
gacaccgaccacctgctgacggtgatggagcaatggatgcgcacgcggtga
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