Streptomyces rimosus: CP984_10465
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Entry
CP984_10465 CDS
T07052
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
srim
Streptomyces rimosus
Pathway
srim03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
srim00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CP984_10465
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
srim03019
]
CP984_10465
03016 Transfer RNA biogenesis [BR:
srim03016
]
CP984_10465
Enzymes [BR:
srim01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
CP984_10465
Messenger RNA biogenesis [BR:
srim03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
CP984_10465
Transfer RNA biogenesis [BR:
srim03016
]
Prokaryotic type
tRNA degradation factors
CP984_10465
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
KH_1
RNase_PH_C
KH_2
KhpA-B_KH
PCB_OB
Motif
Other DBs
NCBI-ProteinID:
QEV75386
LinkDB
All DBs
Position
complement(2593772..2595982)
Genome browser
AA seq
736 aa
AA seq
DB search
MENETHYAEAVIDNGSFGTRTIRFETGRLAKQAAGSAVAYLDDDTMVLSATTASKNPKDQ
LDFFPLTVDVEERMYAAGKIPGSFFRREGRPSEDAILTCRLIDRPLRPSFKKGLRNEIQI
VETIMALNPDHLYDVVAINAASCSTQLAGLPFSGPIGGTRVALINGQWVAFPTHTELENA
VFDMVVAGRVLPDGDVAIMMVEAEATEKTIQLVKDGAEAPTEEVVAAGLEAAKPFIKVLC
RAQSDLAAKAAKPVGEFPIFLDFQDDVLEALTKAVKGELAQALTIAGKQEREAELDRVKA
LAAEKLLPEFEGREKEISAAYRALTKSLVRERVIKEKVRIDGRGVTDIRTLAAEVEAIPR
VHGSALFERGETQILGVTTLNMLRMEQQLDTLSPVTRKRYMHNYNFPPYSVGETGRVGSP
KRREIGHGALAERAIVPVLPTREEFPYAIRQVSEALGSNGSTSMGSVCASTMSLLNAGVP
LKAPVAGIAMGLISEEIDGKTHYVALTDILGAEDAFGDMDFKVAGTKQFVTALQLDTKLD
GIPASVLAAALKQARDARLHILDVMNEAIDVPDEMSPNAPRIITVKIPVDKIGEVIGPKG
KMINQIQEDTGADITIEDDGTIYIGAADGPAAEAARATINGIANPTMPEVGERYLGTVVK
TTTFGAFVSLLPGKDGLLHISQIRKLAGGKRVENVEDVLAVGAKVQVEIAEIDQRGKLSL
APVIEGEDEAKDDAAK
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
gtggagaacgagacccactacgccgaggccgtcatcgacaacggctccttcggcacccgc
accatccgcttcgagacgggccgcctggccaagcaggccgccggctccgccgtcgcgtac
ctggacgacgacaccatggtgctgtcggccaccaccgcttcgaagaaccccaaggaccag
ctggacttcttcccgctgaccgtggacgtcgaggagcggatgtacgctgccgggaagatc
cccggctccttcttccgccgtgagggccggccgtccgaggacgcgatcctcacctgccgc
ctgatcgaccggccgctgcgcccctccttcaagaagggcctgcgcaacgagatccagatc
gtcgagacgatcatggcgctcaaccccgaccacctctacgatgtggtcgccatcaacgcc
gcctcctgctccacgcagctggccggcctgcccttctccggcccgatcggcggcacccgc
gtcgccctgatcaacggccagtgggtcgccttcccgacccacaccgagctggagaacgcg
gtcttcgacatggtcgtggccggccgtgtcctcccggacggcgacgtcgcgatcatgatg
gtcgaggccgaggccaccgagaagaccatccagctggtcaaggacggcgccgaggccccc
accgaggaggtcgtcgccgccggtctggaggccgccaagcccttcatcaaggtgctgtgc
cgggcccagtcggacctggccgccaaggccgctaagccggtcggcgagttcccgatcttc
ctcgacttccaggacgacgtcctggaggcgctgaccaaggccgtcaagggcgagctggcc
caggccctgaccatcgccggcaagcaggagcgcgaggccgagctggaccgcgtcaaggcg
ctggccgccgagaagctgctgccggagttcgagggccgcgagaaggagatctccgccgcc
taccgcgcgctgaccaagagcctggtgcgcgagcgcgtcatcaaggagaaggtccgcatc
gacggccgtggcgtgacggacatccgtacgctcgccgccgaggtcgaggccatcccgcgg
gtgcacggctcggccctgttcgagcgtggcgagacccagatcctgggcgtcaccaccctg
aacatgctccgcatggagcagcagctggacaccctctccccggtgacccgcaagcgctac
atgcacaactacaacttcccgccgtactcggtcggcgagaccggccgcgtgggctcgccc
aagcgccgcgagatcggccacggcgcgctcgccgagcgcgccatcgtgccggtgctgccg
acgcgcgaggagttcccgtacgccatccgccaggtctccgaggcgctgggctccaacggc
tcgacctcgatgggctcggtctgcgcctcgacgatgtcgctgctgaacgccggtgtgccg
ctcaaggccccggtcgccggcatcgccatgggcctgatctccgaggagatcgacggcaag
acgcactacgtcgccctcaccgacatcctcggtgcggaggacgcgttcggcgacatggac
ttcaaggtcgccggtacgaagcagttcgtcaccgccctgcagctggacaccaagctggac
ggcatcccggcgtccgtgctggccgcggccctcaagcaggcccgcgacgcccgtctgcac
atcctggacgtgatgaacgaggcgatcgacgttccggacgagatgtccccgaacgcgccg
cgcatcatcaccgtcaagatcccggtggacaagatcggtgaggtcatcggccccaagggc
aagatgatcaaccagatccaggaggacaccggcgccgacatcacgatcgaggacgacggc
accatctacatcggtgccgccgacggcccggccgccgaggccgcccgcgccacgatcaac
ggcatcgccaacccgaccatgccggaggtcggcgagcgctacctgggcacggtcgtcaag
accaccaccttcggtgcgttcgtctccctgctcccgggcaaggacggtctgctgcacatc
tcgcagatccgcaagctggccggcggcaagcgcgtcgagaacgtcgaggacgtgctcgcc
gtgggcgccaaggtccaggtggagatcgccgagatcgaccagcgcggcaagctgtcgctg
gctccggtcatcgagggcgaggacgaggcgaaggacgacgccgccaagtga
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