Streptomyces rimosus: CP984_12580
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Entry
CP984_12580 CDS
T07052
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
srim
Streptomyces rimosus
Pathway
srim00300
Lysine biosynthesis
srim00470
D-Amino acid metabolism
srim01100
Metabolic pathways
srim01110
Biosynthesis of secondary metabolites
srim01120
Microbial metabolism in diverse environments
srim01230
Biosynthesis of amino acids
Module
srim_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
srim00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
CP984_12580 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
CP984_12580 (lysA)
Enzymes [BR:
srim01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
CP984_12580 (lysA)
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Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
RGL11_C
Motif
Other DBs
NCBI-ProteinID:
QEV75748
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All DBs
Position
complement(3086733..3088124)
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AA seq
463 aa
AA seq
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MSRSAHPAGPRHGDVLPEGHYSAPPADLNSIDSRVWARTVRRNEDGVITVGGADVAALAE
EFGTPAYFLDEEDFRGRCRAWKDAFGEGADVFYAGKAFLSRAVVRWLAEEGMNLDVCSGG
ELATALAAGMPAERIALHGNNKSVDEITRAVEAGVGRIVLDSFQEIVRVAHIADRLGKRQ
RVQIRVTVGVEAHTHEFIATAHEDQKFGIALAGGQAAEAVRRVLKLDGLELTGIHSHIGS
QIFDMAGFEVSARRVVQLLTEVRDEHGVELPEIDLGGGLGIAYTSDDDPREPHEIAKALG
DIVTRECAAAGLAVPRLSVEPGRAIVGPTAFTLYEVGTVKELDGLRTYVSVDGGMSDNIR
TALYDAEYSVALASRASDAPPMLSRVVGKHCESGDIVVRDAFLPADVAPGDLLAVPATGA
YCRSMASNYNHALRPPVVAVRDGAGRVIVRRETEEDLLRLDVG
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgagccgttccgcacatcccgcaggcccccgccacggcgacgtcctgcccgaggggcac
tactccgctccgcccgccgatctgaacagcatcgattcccgtgtgtgggcccgtacggtc
cgccggaacgaggacggtgtgatcaccgtcggcggggccgatgtcgccgcgctcgccgag
gagttcgggacgcccgcgtacttcctggacgaggaggatttccgggggcggtgccgggcc
tggaaggacgccttcggagagggggcggacgtcttctacgccggtaaggcgtttctttcg
cgggccgtggtgaggtggctggcggaggaaggcatgaatctcgatgtgtgcagtggcggc
gagctggccaccgcgctcgcggcggggatgcctgccgagcggatcgcgctgcacggcaac
aacaagagcgtcgatgagatcacccgggccgtggaggccggggtcgggcggatcgtgctg
gattcgttccaggagatcgtgcgggtcgcgcacatcgcggaccggctgggcaagcggcag
cgggtgcagatccgggtgacggtgggcgtggaggcgcacacccacgagttcatcgcgacc
gcgcacgaggaccagaagttcgggatcgcgctggccggcgggcaggccgcggaggccgta
cggcgggtgctgaagctggacgggctggagctgaccggcatccactcgcacatcgggtcg
cagatcttcgacatggccggcttcgaggtgtcggcgcggcgcgtggtgcagctgctgacc
gaggtacgggacgagcacggagtggagctgccggagatcgacctgggcggcgggctcggg
atcgcctacacctcggacgacgatccgcgcgagccgcacgagatcgcgaaggcgctcggg
gacatcgtgacgcgggagtgcgcggcggccgggctggccgtgccgcggctgtccgtggag
ccgggccgcgccatcgtcggccccaccgcgttcaccctgtacgaggtcggcacggtcaag
gagctggacgggctgcgtacctacgtctccgtcgacggcggtatgtccgacaacatccgt
acggccctctacgacgccgagtacagcgtggcgctggcctcgcgggcctcggacgcgccg
ccgatgctgtcccgtgtggtcggcaagcactgcgagagcggcgacatcgtcgtacgggac
gcgttcctgcccgccgacgtggcgcccggcgacctgctcgcggtgcccgcgaccggcgcg
tactgccggtcgatggcgagcaactacaaccacgcgctgcggccgccggtggtcgcggtg
cgtgacggcgcggggcgggtcatcgtccggcgcgagacggaggaggacctgctgcgcctc
gacgtcgggtag
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