Streptomyces rimosus: CP984_13175
Help
Entry
CP984_13175 CDS
T07052
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
srim
Streptomyces rimosus
Brite
KEGG Orthology (KO) [BR:
srim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
srim03021
]
CP984_13175
Transcription machinery [BR:
srim03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CP984_13175
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
DUF7343
HTH_23
MarR_2
HTH_24
Sigma70_ECF
MarR
HTH_Crp_2
NirdL-like_HTH
HTH_3
IF2_N
HTH_AraC
GerE
Motif
Other DBs
NCBI-ProteinID:
QEV75843
LinkDB
All DBs
Position
3227990..3228925
Genome browser
AA seq
311 aa
AA seq
DB search
MAPGVAIPEQHARPQPVGADDHGGRLDAEQAERADHMDQSEHRRNERDPHTPHHPHDPHD
PHDRSGARAMFYELRKLPDGSAERAELRNALVRMHLPLVEHLARRFRNRGEPLDDLTQVA
TIGLIKSVDRFDPDRGVEFSTYATPTVVGEIKRHFRDKGWAVRVPRRLQELRLSLTTATA
ELSQRHGRAPTVHELAEHLAISEEEVLEGLESANAYSTLSLDVPDTDDESPAVADTLGAE
DEALEGVEYRESLKPLLEDLPPREKKILLLRFFGNMTQSQIAQEVGISQMHVSRLLARTL
AQLRDKLLVEE
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atggcgcccggtgtggccatccccgagcagcatgcccggccgcaaccggtgggcgcggat
gaccacggcggccggttggacgcggagcaggcagagcgggcggaccacatggaccagagc
gagcacaggcggaacgagcgcgatccgcacaccccgcaccaccctcatgaccctcacgac
ccccatgaccggagcggcgcgcgggcgatgttctacgagctgcgcaagctgcccgacggc
tcggccgagcgcgccgaactgcgcaacgcgctcgtgcgcatgcacctgccgctcgtcgag
cacctggcccggcgcttccgcaaccgcggcgagccgctggacgacctgacccaggtcgcc
accatcggcctgatcaagtccgtggaccgcttcgacccggaccgcggcgtggagttctcc
acgtacgccacgcccaccgtcgtcggcgagatcaagcggcacttccgcgacaagggctgg
gcggtccgcgtgccccgccgcctccaggagctgcggctgtcgctgaccaccgcgaccgcc
gagctctcccagcgccacggccgcgccccgacggtccatgagctcgccgagcacctcgcg
atctccgaggaagaggtcctggagggcctggagtcggcgaacgcgtacagcaccctgtcc
ctggacgtgccggacaccgacgacgagtcgccggccgtcgccgacaccctgggcgccgag
gacgaggcgctggagggtgtcgagtaccgcgaatccctcaagccgctgctggaggatctg
ccgccgcgcgagaagaagatcctgctgctgcgcttcttcggcaacatgacccagtcgcag
atcgcccaggaggtcggcatctcgcagatgcacgtctcccgcctgctggcccgcaccctg
gcccagctccgcgacaagctcctcgtggaggagtga
DBGET
integrated database retrieval system
