Streptomyces rimosus: CP984_16020
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Entry
CP984_16020 CDS
T07052
Name
(GenBank) helicase
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
srim
Streptomyces rimosus
Pathway
srim03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
srim00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
CP984_16020
09124 Replication and repair
03420 Nucleotide excision repair
CP984_16020
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
srim03021
]
CP984_16020
03400 DNA repair and recombination proteins [BR:
srim03400
]
CP984_16020
Enzymes [BR:
srim01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CP984_16020
Transcription machinery [BR:
srim03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
CP984_16020
DNA repair and recombination proteins [BR:
srim03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
CP984_16020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
SNF2-rel_dom
Motif
Other DBs
NCBI-ProteinID:
QEV76321
LinkDB
All DBs
Position
3851047..3852690
Genome browser
AA seq
547 aa
AA seq
DB search
MNGPLIVQSDKTLLLEVDHEQAEACRRAIAPFAELERAPEHMHTYRVTPLGLWNARAAGH
DAEQVVDALVQFSRYPVPHALLVDIAETMSRYGRLTLSKHPAHGLVLTTTDRPVLEEVLR
SKKVQPLVGARLDPDTVVVHPSERGQIKQTLLKLGWPAEDLAGYVDGEAHPIELDESGWA
LRPYQQQAVEGFWHGGSGVVVLPCGAGKTLVGAGAMARAKATTLILVTNTVSARQWKHEL
VKRTSLTEDEVGEYSGTKKEIRPVTIATYQVLTTKRKGVYPHLELFDSRDWGLIVYDEVH
LLPAPVFKFTADLQARRRLGLTATLVREDGRESDVFSLIGPKRFDAPWKEIEAQGYIAPA
DCVEVRVNLTDSERLAYATAEPEEKYRYCATTASKQSVTEALVRRHKGEQTLVIGQYIDQ
LDELGEHLGAPVIKGETTNAQREKLFDAFREGEISVLVVSKVANFSIDLPEATVAIQVSG
TFGSRQEEAQRLGRVLRPKADGHEARFYSVVARDTVDQDFAAHRQRFLAEQGYAYRIVDA
TELLAEG
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
gtgaacggacctctcatcgtccagagcgacaaaacgctgctgctggaagtcgaccacgag
caggcggaggcgtgccggcgggccatcgcgccgtttgccgagctggagcgggcgcccgag
cacatgcacacgtaccgggtgacgccgctcgggctgtggaacgcgcgggccgccgggcat
gacgccgagcaggtcgtggacgcgctggtgcagttctcgcggtatccggtgccgcacgcg
ctgctggtggacatcgccgagacgatgtcgcggtacgggcggctgacgctgagcaagcac
ccggcgcacgggctggtgctgaccaccaccgaccggccggtgctggaggaggtgctgcgg
tcgaagaaggtgcagccgctggtgggggcgcggctggatccggacacggtggtggtgcat
ccgtccgagcgggggcagatcaagcagacgctgctcaagctgggctggccggcggaggac
ctggccgggtatgtggacggtgaggcgcatccgatcgagctggacgagtcggggtgggcg
ctgcggccgtaccagcagcaggccgtcgaggggttctggcacggcgggtcgggtgttgtc
gtgctgccctgtggtgcggggaagacgctggtgggggccggggcgatggcgcgggccaag
gcgaccacgctgatcctggtgaccaacaccgtctcggcccggcagtggaagcacgagctg
gtgaagcggacctcgctgaccgaggacgaggtgggcgagtacagcggtacgaagaaggag
atccggccggtcaccatcgccacgtaccaggtgctgacgaccaagcggaagggcgtctat
ccgcacctggagctgttcgattcgcgggactgggggctgatcgtctacgacgaggtgcat
ctgctgcccgcgccggtcttcaagttcacggccgatctccaggcgcggcggcggctgggg
ctgaccgcgaccctcgtacgggaggacgggcgcgagtcggacgtcttctcgctgatcggg
ccgaagcgtttcgacgcgccgtggaaggagatcgaggcgcaggggtacatcgcaccggcg
gactgtgtcgaggtgcgggtcaacctgacggactcggagcggctggcgtacgcgacggcc
gagcccgaggagaagtaccggtactgcgcgacgacggccagcaagcagagcgtgaccgag
gcgctggtgcggcggcacaagggcgagcagacgctggtcatcgggcagtacatcgaccag
ctcgacgagctgggcgagcatctgggtgccccggtgatcaagggcgagacgaccaacgcg
cagcgcgagaagctcttcgacgcgttccgggagggcgagatctccgtgctggtcgtctcc
aaggtcgcgaacttctcgatcgacctgccggaggcgacggtcgcgatccaggtgtcgggc
acgttcgggtcccggcaggaggaggcgcagcggctggggcgggtgctgcggcccaaggcg
gacgggcacgaggcgcggttctactcggtcgtcgcccgcgacaccgtcgaccaggacttc
gcggcgcaccggcagcgcttcctggcggagcaggggtacgcgtaccggatcgtggacgcg
acggagctgctggcggagggctga
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