Streptomyces rimosus: CP984_16835
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Entry
CP984_16835 CDS
T07052
Name
(GenBank) type VI secretion protein
Organism
srim
Streptomyces rimosus
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TraG-D_C
Motif
Other DBs
NCBI-ProteinID:
QEV76463
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Position
4009429..4011003
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AA seq
524 aa
AA seq
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MRQEQGPGGTGGPGGGRGRGVPDSLLIGVLVFLLGLTVLAWTATGLAGLFTHGAWPDGVT
FTRTPLALRSLIAAPHDLPAAWPGTPAAQLSGYGLFWGILISELLVLVVLTVFALGTIAR
YRVVRANRRAEGRGSDGGAGGTEDVVRGGAAPAGVPEAAAVAPASAAPVPVSSPALEAPM
PAPAAGPETPSVAPSAPALAPDLTPAPVPAPAGPIAPPVHYGTDRRQAIALASEAIAAAE
GPLVVATTDPALWADTKDARAKLGPLLTYDPQHLLDTPARLRWSPTSGCEDIAVAAERAA
ALLTPVRPSSVLDSAVADSATTLLRCWLHAAAVDGRPFRQLHRWAHTSGAAHEPVRVLRT
NRKASAGQAGELESVLTAHAERREMAQELVSRTLACLSSIHIRDACNPARSDALLLESFI
DEGGTLYVAGESIEDPRTAPGAMPLLIALLSHVVERGRRMAERSSAGRLDPPLTLVLHDI
AALAPFPALPGLLETGREQGLLTLATLRSQEQARARWPHHALPG
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
ttgcggcaggagcaggggccgggcggtacgggcggcccgggtggcggccggggtcggggc
gttcccgactccctcctgataggcgtactggtcttcctcctgggcctcaccgtcctggcg
tggaccgcgacgggcctggccgggctcttcacccacggcgcctggccggacggcgtgacc
ttcacccgtacgccgctggccctgcgcagcctgatagccgccccgcacgatctcccggcc
gcctggcccggcacccccgccgcccagctctccgggtacggactgttctggggcatcctc
atcagcgaactgctggtgctggtggtgctgacggtgttcgcgctggggacgatcgcccgc
taccgggtggtacgggccaatcggcgggccgagggccgggggtcggacgggggtgccggg
ggcaccgaggatgtcgtacggggtggggcggcgcccgcgggtgtccctgaggcggctgcg
gtggcgccggcatctgctgcgcctgtcccggtgtcgtcgcccgccttggaagcgcctatg
cccgccccggcggccgggcccgagacgccctcggtcgcccccagcgctcccgctctcgca
cctgacctcacacccgctcccgttccggccccggccggcccgatcgccccgcccgtgcac
tacggaaccgaccgccgccaagccatcgcgctcgcctccgaggccatcgccgcggccgag
gggcccctcgtcgtggccaccaccgaccccgcgctgtgggccgacaccaaggacgcccgc
gccaagctgggcccgctgctgacctacgatccccagcacctcctggacaccccggcccgg
ctgcgctggtccccgacgtccggctgtgaggacatcgccgtcgccgccgagcgcgcggcc
gcgctgctcacccccgtacggccctccagcgtcctcgactcggcggtggccgactccgcg
acgaccttgctgcgctgctggctgcacgccgccgcggtggacggacggcctttccgccag
ctgcaccgctgggcgcacaccagcggcgccgcgcacgaaccggtacgtgttctgcgtacg
aaccggaaggcgtcggcgggccaggcgggcgagctggagtccgtactgaccgcacatgcg
gaacgccgcgagatggcgcaggaattggtctcccgcaccctggcgtgcctctcctcgatc
cacatccgggacgcctgcaatccggcgcgatccgatgccctgcttctcgaatctttcatc
gacgaagggggaacgctttacgtggcaggggaatccatcgaggatccgcggaccgctccg
ggtgcgatgccgctgctcatcgcgctcctctcccacgtggtcgagcgcggccgccgcatg
gccgaacggtcatccgccggtcggctcgacccaccactcaccctcgtgctgcacgacatc
gcggcgctcgcgccgttcccggcgctgcccggcctcctcgaaaccggccgtgagcagggg
ctgttgacgctggccaccctgcgctcccaggaacaggcccgcgcccgctggccgcaccac
gccctgccgggctga
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