Streptomyces rimosus: CP984_22375
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Entry
CP984_22375 CDS
T07052
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
srim
Streptomyces rimosus
Pathway
srim03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
srim00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CP984_22375
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
srim03021
]
CP984_22375
03400 DNA repair and recombination proteins [BR:
srim03400
]
CP984_22375
Enzymes [BR:
srim01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CP984_22375
Transcription machinery [BR:
srim03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CP984_22375
DNA repair and recombination proteins [BR:
srim03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CP984_22375
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
SAM_EPH
Motif
Other DBs
NCBI-ProteinID:
QEV77376
LinkDB
All DBs
Position
5214738..5215760
Genome browser
AA seq
340 aa
AA seq
DB search
MLIAQRPSLTEEVVDEYRSRFVIEPLEPGFGYTLGNSLRRTLLSSIPGAAVTSIRIDGVL
HEFTTVPGVKEDVTDLILNIKQLVVSSEHDEPVVMYLRKQGPGLVTAADIAPPAGVEVHN
PDLVLATLNGKGKLEMELTVERGRGYVSAVQNKQVGQEIGRIPVDSIYSPVLKVTYKVEA
TRVEQRTDFDKLIVDVETKQAMRPRDAMASAGKTLVELFGLARELNIDAEGIDMGPSPTD
AALAADLALPIEELELTVRSYNCLKREGIHSVGELVARSEADLLDIRNFGAKSIDEVKAK
LAGMGLALKDSPPGFDPTAAADAFGADDDADAGFVETEQY
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgctgatcgctcagcgtccctcgctgaccgaagaggtcgtcgacgaataccgctcccgg
ttcgtgatcgagccgctggagccgggcttcggctacaccctcggcaactccctgcgtcgt
acgctcctctcctcgatcccgggtgcggcggtcacgtccatccgcatcgacggtgtcctg
cacgagttcaccaccgtgccgggcgtcaaggaggacgtcaccgacctcatcctgaacatc
aagcagctggtcgtctcctccgagcacgacgagccggtcgtgatgtacctgcgcaagcag
ggccccggcctggtcaccgccgcggacatcgccccgccggccggtgtcgaggtgcacaac
cccgacctggtcctcgccaccctcaacggcaagggcaagctggagatggagctgaccgtc
gagcgcggtcgcggctacgtctccgccgtgcagaacaagcaggtcggccaggagatcggc
cgcatcccggtcgactccatctactcgccggtcctcaaggtcacctacaaggtcgaggcg
acccgagtcgagcagcgcaccgacttcgacaagctgatcgtcgacgtcgagaccaagcag
gccatgcgtccccgtgacgcgatggcgtccgccggcaagaccctggtggagctgttcggc
ctcgcgcgcgagctcaacatcgacgccgagggcatcgacatgggcccgtcccccacggac
gccgccctggccgccgacctggcgctgccgatcgaggagctggagctcaccgttcggtcg
tacaactgcctcaagcgcgagggcatccactcggtgggcgagctcgtcgcccgctccgag
gcggacctgctcgacatccgcaacttcggtgcgaagtcgatcgacgaggtcaaggcgaag
ctggccggtatgggcctggcgctgaaggactcgcctcccgggttcgacccgaccgccgcg
gcggacgcctttggcgccgacgatgacgcggatgcgggcttcgtggagaccgagcagtac
tga
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