Streptomyces rimosus: CP984_26340
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Entry
CP984_26340 CDS
T07052
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
srim
Streptomyces rimosus
Pathway
srim03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
srim00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CP984_26340
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
srim03400
]
CP984_26340
Enzymes [BR:
srim01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
CP984_26340
DNA repair and recombination proteins [BR:
srim03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CP984_26340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
OB_YrrC
UvrD_C_2
SH3_13
HHH_5
Viral_helicase1
AAA_11
AAA_22
HHH
Helicase_RecD
PIF1
NPHP3_N
TraI_hel_assoc_N
AAA_16
PhoH
nSTAND3
HTH_IclR
TrwB_AAD_bind
AAA
RsgA_GTPase
DEAD
ABC_tran
DUF87
UvrD_C
Motif
Other DBs
NCBI-ProteinID:
QEV78033
LinkDB
All DBs
Position
6071408..6073675
Genome browser
AA seq
755 aa
AA seq
DB search
MFNAAVVEGVLERITYANEETGYTVARLDTGNSGDLLTVVGSLLGAQPGESLRLEGRWGS
HPQYGRQFTVENYTTVLPATIQGIRRYLGSGLIKGIGPVMADRIAEYFGLDTLDVIEQEP
KRLVEVPGLGPKRMKRIADAWEEQKAIKEVMVFLQGVGVSTSIAVRIYKKYGDASISVVK
NEPYRLAADVWGIGFLTADRIAQAIGIPQDSPERVKAGLQYALSQSTDQGHCYLPEEELI
AASVKLLHVDTGLVIDCLGELAANPEGVVRETVPAPDGGDPITAVYLVPFHRAETSLASQ
LLRLLGTSEDRMPSFQTVHWDKALAWLAERTKASLASEQEAAVRLALTEKVAVLTGGPGC
GKSFTVRSIVELARAKKAKVVLAAPTGRAAKRLSELTGVEASTVHRLLELKPGGDAAYDK
DRPLDADLVVVDEASMLDLLLANKLIKAVPPGAHLLLVGDVDQLPSVGAGEVLRDLLAER
CPVPSVRLTRIFRQAQQSGVVTNAHRINVGVLPITEGMTDFYLFPEEDSEEAGRVAVDVV
ARRIPAKFGLDPRRDVQVLTPMHRGPAGAGTLNGLLQQALTPARPDVPERRVGGRVFRVG
DKVTQIRNNYEKGDNGVFNGTVGVVTKINSDEQWLTVLTDEDEEISYDFDELDELAHAYA
VTIHRSQGSEYPAVVIPVTTGAWMMLQRNLLYTGVTRAKRLVVLVGSRKALGQAVRTVSA
GRRWTALRHRLAGAVRGHLFPKRGEGEQDGQLERH
NT seq
2268 nt
NT seq
+upstream
nt +downstream
nt
atgttcaatgcagccgtggtcgaaggggtcctggagcggatcacctacgccaatgaggag
accggttacacggttgcgcgtctggacacgggcaactccggtgacctcctcactgtcgtc
gggtcgctgctgggcgcacagccgggggagtcgctgcgtctggagggccgttggggctcc
cacccgcagtacggacggcagttcaccgtcgagaactacaccaccgtcctgcccgccacg
atccagggcatacggcgctacctcggctccggcctgatcaagggcatcggcccggtcatg
gccgaccgcatcgccgagtacttcggcctggacacactcgacgtcatcgagcaggagccg
aagcgcctcgtcgaggtgcccggcctcggcccgaagcgtatgaagcggatcgccgacgcc
tgggaagagcagaaggcgatcaaggaggttatggtcttcctccaaggggtgggcgtctcc
acctccatcgcggtgcgcatctacaagaagtacggcgatgcctcgatctccgtcgtcaag
aacgagccctaccgcctcgccgccgacgtgtggggcatcggcttcctgaccgccgaccgc
atcgcccaggccatcggcatcccgcaggacagcccggagcgggtcaaggcgggtctgcag
tacgccctctcgcaatccaccgaccaggggcactgttacctcccggaggaggaactgatc
gccgcctcggtcaagttgctgcatgtcgacacaggcctggtcatcgactgcctcggggag
ctggcggcgaatccggagggtgtggtccgcgagaccgtgcccgccccggacggcggggac
cccatcaccgccgtctacctggtccccttccaccgggccgagacctccctggcctcccaa
ctgctgcggctgctgggcacgagcgaggaccggatgccgtcgttccagaccgtgcattgg
gacaaggcgttggcctggctcgccgagcgtacgaaggccagcctggcgtcggagcaggag
gccgccgtacggctggcactcacggagaaggtcgcggtgctgaccggcggcccggggtgc
ggaaagtccttcacggtccgctcgatcgtggagctggcccgcgccaagaaggccaaggtg
gtcctcgcggcccccaccggccgggccgccaaacgtctctcggagctgacgggcgtcgag
gcgtccacggtgcaccggctgctggagctcaaaccgggcggggacgccgcgtacgacaag
gaccgcccgttggacgccgacctggtcgtggtcgacgaagcgtccatgctcgacctgctg
ctcgccaacaagctgatcaaggcggtgccgccgggcgcccacctcctcctggtgggagac
gtggatcagttgccctcggtgggcgcgggtgaggtgctgcgcgatctgctcgccgagcgc
tgcccggtcccgtccgtacggctgacccggatcttccgccaggcccagcagtcgggcgtg
gtcacgaacgcccaccgcatcaacgtgggtgtgctgccgatcacggagggcatgaccgat
ttctacctcttccccgaggaggattccgaggaggccgggcgggtcgcggtcgatgtggtg
gcccgccgtatcccggcgaagttcggcctggacccgcgccgggacgtgcaggtgctcact
ccgatgcaccgtggcccggccggtgccggcacgctgaacggactcctccagcaggccctc
accccggcccggccggacgtgccggagcggcgtgtcggcggccgggtatttcgggtgggc
gacaaggtgacgcagatccgcaacaactatgagaagggcgacaacggcgtcttcaacggc
accgtcggcgtcgtcaccaagatcaactcggatgagcagtggctgacggtgctcacggac
gaggacgaggagatctcctacgatttcgacgagctggacgagctggctcacgcttacgcg
gtgaccatccaccgctcccagggcagcgaatatccggcggtggtgattccggtcaccacc
ggcgcatggatgatgctgcagcggaacctgctctatacgggtgttacgcgggcaaagcga
ctggtggtgctggtcggctcccgtaaggctctggggcaggctgtacgcaccgtatccgcc
gggcggaggtggaccgcgctacgtcaccgactcgcaggcgcagtgcgtggtcacctcttc
cccaaacggggcgaaggggagcaggatgggcagctggagcggcactga
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