Streptomyces rimosus: CP984_27245
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Entry
CP984_27245 CDS
T07052
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
srim
Streptomyces rimosus
Pathway
srim03030
DNA replication
srim03430
Mismatch repair
srim03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
srim00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CP984_27245 (holA)
03430 Mismatch repair
CP984_27245 (holA)
03440 Homologous recombination
CP984_27245 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
srim03032
]
CP984_27245 (holA)
03400 DNA repair and recombination proteins [BR:
srim03400
]
CP984_27245 (holA)
Enzymes [BR:
srim01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CP984_27245 (holA)
DNA replication proteins [BR:
srim03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CP984_27245 (holA)
DNA repair and recombination proteins [BR:
srim03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CP984_27245 (holA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
DNA_pol3_gamma3
Lysyl_endopep_N
Motif
Other DBs
NCBI-ProteinID:
QEV78190
LinkDB
All DBs
Position
6288317..6289300
Genome browser
AA seq
327 aa
AA seq
DB search
MARKTANDDPLAPITIAVGQEDLLLDRAVQQVVAAARAADADTDVRDLTPDQVQPGTLAE
LTSPSLFAERKVVVVRNAQDLSADSVKDVKAYLGAPVEEITLVLLHAGGAKGKGLLDAAR
KVGAREIACPKMTKPADRLAFVRGEFRTAGRSATPEACQALVDAIGSDLRELASACSQLV
ADIEGTIDDAIVGRYYRGRAEASSFTVADRAVEGRAAEALEALRWAMSTGVAPVMITSAL
AQGVRAIGKLASAPRGARPGDLARELGMPPWKIDRVRQQMRGWSADGVATALLAVAEADA
GVKGGGDDPEYALEKAVVTIARAARSR
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atggccaggaagacagcaaacgacgacccgctcgcgccgatcacgatcgccgtgggccag
gaggacctgctcctggaccgcgccgtgcagcaggtggtggcggcggcccgcgccgccgac
gcggacaccgatgtgcgtgacctcacgcccgaccaggtccagcccggcacgctcgccgag
ctgaccagcccctcgctgttcgccgagcgcaaggtcgtggtggtccggaacgcccaggac
ctgtccgcggactcggtcaaggacgtcaaggcgtacctcggcgcccccgtcgaggagatc
acgctggtgctgctgcacgccggcggcgccaagggcaagggcctgctggacgccgcccgc
aaggtcggcgcgcgggagatcgcctgccccaagatgaccaagcccgccgaccgcctggcg
ttcgtgcgcggcgagttccgtacggccggccgctccgccacccccgaggcgtgccaggca
ctggtggacgcgatcggcagcgacctgcgcgagctggcctcggcctgctcgcagctggtc
gccgacatcgagggcacgatcgacgacgccatcgtcggccgctactaccgcggccgggcc
gaggcgtccagcttcaccgtcgcggaccgcgccgtggagggccgggccgccgaggccctg
gaggcgctgcgctgggccatgtcgacgggcgtcgcccccgtcatgatcaccagcgcgctc
gcccagggcgtccgcgccatcggcaagctggcctccgccccgcgcggcgcccgccccggc
gacctcgcccgcgagctgggcatgccgccctggaagatcgaccgggtgcggcagcagatg
cgcggctggtcggcggacggcgtcgccacggcgctgctcgcggtggccgaggccgacgcg
ggggtcaagggcggcggcgacgaccccgagtacgcgctcgaaaaggccgtcgtcacgatc
gcccgcgcggcccgctcccgctga
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