Streptomyces rimosus: CP984_29550
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Entry
CP984_29550 CDS
T07052
Name
(GenBank) helix-turn-helix domain-containing protein
Organism
srim
Streptomyces rimosus
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BTAD
Trans_reg_C
AAA_16
AAA_22
nSTAND1
TPR_12
NB-ARC
Motif
Other DBs
NCBI-ProteinID:
QEV78565
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Position
6742945..6746289
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AA seq
1114 aa
AA seq
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MRYGILGTAQAHRSDGTPVAIGGPRLRTLLTALALRPGRALTAELLIADVWGPRPPADAT
GALQALIARLRRSVGREAIASVHGGYRLCAVPADVDLHRFEQLADEGARALADSDAVKAA
ALLDDALALWRGPALADLPEAAGEAARAERAHLEARRTRLAADVALGRPGQALPALTTLC
EDHPLDEPLQALRLRALRAAGRTAEALDAYASVQADIADRLGAAPGPELRSLHMELLREE
EAVTGEAVAHGAAAADHPAPAPAPRRGNLRTRTTSFVGREDDLAVIRADLGVHRLVTLLG
PGGAGKTRLSQESAEAAAAAAPGMWPDGVWFAELAPVDDPQTVPEAVLTALGARETVVRT
TADELRAAADPTTYDPMARLAEHCASRRMLLVLDNCEHVIGAAAELADRLLAECPGVTVL
ATSREPLAVPGEALRPVEPLPDPVALRLLADRGAAARPGFRVEDDPVACAEICRRLDGLP
LAIELAAARLRLLTPRQLADRLDDRFRLLTSGSRTVLPRQQTLRAVVDWSWDLLDDPERA
VLRRLSVFSGGCDLAQAEEVCADEGSTGGSVAPRDVAALLGSLIDKSLVVAAPGGDGRMR
YRLLETVSEYAGERLDEAGERAAAERRHLVAYRELARTADPLLRGPEQCAWLERLELEHD
NLRTALRRAVAVRDEHEALCLVLSLQWFWSLRDHRADARAWSAAVAALGPDPFAPPVEPA
PVLHARPIDAPPPMDPEQLQEARREVRLVGLANSDSDIAVLGNPERREELAGILAAYRSD
MPQTCKVPGVLWYYAMMMTGRFDDLANLVHQAVSACREYGYEWELANVLQLRAKIFNDRR
DGLAQARQDADESLEIFVRLGDAWGAAEALAGRGEAREGRGEYALAAEDYRAAMRYAEEL
GASGQILLLRTRLGNVLIEDGAVADGERLLREVIELAEKGRSGRDAGPFAHLTLAMHLTC
VGELREARGHLEEVRDLFGQRAPELFQGVVMAALVALDVEEGRYDDVLPRFRAAMPKFRD
ELVQVVAPDLPVVQLLTGARALLGVRGEAGGPDAARLIGAYDALRSTSHRPPRVIRRNRE
RAEVEVRAVLDDAAYERAHAEGGGLSLEEAAALI
NT seq
3345 nt
NT seq
+upstream
nt +downstream
nt
gtgcgctacggaatcctcgggacggcccaggcccaccggagcgacgggacgcccgtcgcc
atcggcgggccccgcctgcgcacgctgctcacggcgctcgcgctgcgtcccggccgggcc
ctcaccgccgagctgctgatcgccgacgtctggggtcctcggccgccggccgacgcgacc
ggcgcgttgcaggcgctgatcgcgcggctgcgccggtccgtcggccgggaggcgatcgcc
tcggtacacggcgggtaccggctctgtgccgtccccgccgatgtcgacctgcaccgtttt
gagcagctggcggacgagggggcgcgggcgctggccgacagcgatgcggtcaaggccgcc
gcgctgctggacgacgccctggcgctgtggcgcggccccgcgctggccgatctcccggag
gcggcgggcgaggcggcccgcgccgaacgtgctcacctggaagcccggcgtacgcggctc
gccgccgatgtcgccctcggccggcccggccaggccctgcccgcgctgacgaccctgtgc
gaggaccatccgctcgacgaaccgctccaggccctgcgtctacgcgcgctgcgggcggcg
gggcgtacggccgaagcgctcgatgcgtatgcctcggtgcaggccgatattgccgaccgt
ctcggcgcggccccgggccctgaactgcgttcccttcatatggagttgctgcgggaggag
gaggcggttacgggggaggctgtggcccatggggcagcggcggccgatcacccggccccc
gcacccgccccccgtcgcggcaacctccgtacccgtaccacttccttcgtcgggcgggag
gacgacctcgcggtgatccgggccgatctgggcgtgcaccggctggtgacgctgctcggg
ccgggcggggcgggcaagacgcggctctcgcaggagagcgccgaggcggcggccgccgcg
gcgcccgggatgtggccggacggcgtgtggttcgcggagctggcgcccgtggacgatccg
cagaccgtgccggaggcggtgctcacggcgctcggggcgcgcgagaccgtcgtccgcacc
actgccgacgaactgcgcgccgcggccgacccgaccacgtacgacccgatggcgcgcctc
gccgagcactgcgcgagccgccggatgctgctcgtcctggacaactgcgagcatgtgatc
ggcgccgccgcggagctggcggaccggctgctggccgagtgtcccggggtgaccgtgctg
gccaccagccgggagccgctggccgtgccgggggaggcgctgcggccggtggaaccgctg
cccgacccggtcgcgctgcggctgctggcggaccgtggtgccgcggcccggcccgggttc
cgcgtcgaggacgacccggtcgcgtgcgcggagatctgccggcggctcgacgggctgccg
ctcgccatcgaactggccgcggcccggctgcggctgctcaccccgcgccagctcgccgac
cggcttgacgaccggttccggctgctgaccagcgggagccgtaccgtactgccccggcag
cagacgctgcgcgcggtggtggactggtcctgggacctgctcgacgaccccgagcgcgcc
gtgctgcgccgcctgtccgtcttctccggcggctgtgatctcgcccaggcggaggaggtc
tgcgcggacgaggggagtacgggcggctcggtggcaccccgcgacgtcgccgccctgctc
gggtcgctgatcgacaagtcgctggtcgtcgccgcgccgggcggggacgggcggatgcgc
taccggctgctggaaaccgtatcggagtacgccggcgagcggctggacgaggcgggggag
cgggccgcggccgagcggcggcacctggtcgcgtaccgcgaactggcccgtacggccgac
ccgttgctgcgcggcccggagcagtgcgcctggctggagcggctggagctggagcacgac
aatctgcggaccgcgctgcgccgggccgtcgccgtgcgcgacgagcacgaggcgctgtgc
ctggtgctgtccctccagtggttctggtcgctgcgcgaccaccgcgccgacgcccgtgcc
tggtcggccgccgtggcggcgctcggccccgaccccttcgcgccgcccgtcgagcccgcg
cccgtcctgcacgcgcggcccatcgacgcgccgccgccgatggacccggagcagctgcag
gaggcgcgtcgcgaggtgcggctggtggggctggccaattcggacagcgacatcgcggtc
ctgggcaacccggagcggcgggaggagctggcgggcatcctggccgcgtaccgcagcgac
atgccgcagacgtgcaaggtgccgggcgtcctgtggtactacgcgatgatgatgacgggc
cggttcgacgacctggcgaacctcgtccaccaggcggtgagcgcctgccgggagtacggc
tacgaatgggagctggcgaacgtcctccagctgcgcgccaagatcttcaacgaccggcgg
gacgggctggcccaggcccgccaggacgccgacgaatccctggagatcttcgtccggctc
ggtgacgcgtggggcgcggcggaagccctggcggggcgcggcgaggcccgcgaggggcgg
ggcgagtacgcgctcgcggccgaggactaccgggcggccatgcgctacgccgaggaactg
ggggcgtccggccagatcctgctgctgcgcacccggctcggcaacgtcctgatcgaggac
ggcgcggtggcggacggcgagcgcctgctgcgcgaagtgatcgaactggcggagaagggc
agaagcggccgggacgccgggccgttcgcgcatctcacgctcgccatgcacctcacctgc
gtcggggagctgcgggaagcgcgcggccacctggaggaggtgcgggacctgttcgggcag
cgcgccccggagctgttccagggtgtggtgatggcggcgctggtcgcgctggacgtcgag
gaagggcgctacgacgatgtgctgccccggttccgcgcggcgatgccgaagttccgggac
gagctggtgcaggtggtcgcgccggatctgccggtcgtccaactcctgaccggcgcacgg
gcgttgctgggcgtacggggtgaggcgggcgggccggacgcggcgcggctgatcggtgcg
tacgacgcgctgcgcagcacctcccaccggccgccgcgggtcatccgcaggaaccgggag
agggccgaggtcgaggtccgcgcggtcctcgacgacgccgcctacgaacgggcccacgcc
gaaggcggcggcctctccctcgaagaggccgccgccctcatctga
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