Streptomyces rimosus: CP984_30330
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Entry
CP984_30330 CDS
T07052
Name
(GenBank) deoxyribonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
srim
Streptomyces rimosus
Pathway
srim03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
srim00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CP984_30330
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
srim03400
]
CP984_30330
Enzymes [BR:
srim01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
CP984_30330
DNA repair and recombination proteins [BR:
srim03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
CP984_30330
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
NUDIX
Motif
Other DBs
NCBI-ProteinID:
QEV78690
LinkDB
All DBs
Position
complement(6920583..6921473)
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AA seq
296 aa
AA seq
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MSTSPSPQHARERNPVGSHVPVAGGLAKVGIPYARDIGGEAVQVFVANPRGWATPAGVPQ
QDEAFREACEREAIPAYVHAPYLINFGSHNDGTVEKSVVSLRHSLLRGRAIGALGVVVHT
GSATGGRPRAEALAQVRERVRPLLDELTHDDDPWLLLEPTAGQGASLCALAEDLGPYFDA
LDRHPKLGVCLDTCHAFAAGHDMAAPGGTKALLDELVDTVGEGRLKLIHANDSKDVVGAH
KDRHENIGSGHIGADPFGELFRHPATAGVPLVIETPGGKEGHAADVARLKELRHPA
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
gtgagcacttccccctccccgcagcacgcccgtgagcgcaatccggtcggcagccatgtg
ccggtggccggcggcctggccaaggtcggcatcccgtacgcccgtgacatcggcggcgag
gccgtgcaggtcttcgtcgccaacccgcgcggctgggccaccccggccggtgtcccgcag
caggacgaggcgttccgggaagcgtgcgagcgggaggcgatcccggcgtatgtgcacgcg
ccctacctcatcaacttcggctcgcacaacgacgggacggtcgagaagtccgtggtctcg
ctgcggcactcgctgctgcgcggccgggcgatcggcgcgctgggcgtggtggtgcacacc
ggctcggcgaccggcgggcggccgcgcgcggaggcgctggcgcaggtgcgcgagcgggtg
cgcccgctgctggacgagctgacgcacgacgacgacccgtggctgctgctggagccgacg
gcggggcagggcgcgtcgctgtgcgcgctggccgaggacctgggcccgtacttcgacgcg
ctggaccggcacccgaagctgggcgtctgcctggacacctgccacgccttcgcggccggg
cacgacatggcggcgcccggcgggacgaaggcgctgctggacgagctggtcgacacggtc
ggcgagggacggctgaaactgatccacgccaacgactccaaggacgtcgtcggcgcccac
aaggaccgccacgagaacatcggctcggggcacatcggggccgacccgttcggcgagctg
ttccggcacccggccacggcgggcgtaccgctggtgatcgagacgccgggcggcaaggag
ggccacgcggcggacgtggcgcgcctgaaggagctgcgccacccggcctga
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