Streptomyces rimosus: CP984_30595
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Entry
CP984_30595 CDS
T07052
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
srim
Streptomyces rimosus
Pathway
srim03030
DNA replication
srim03430
Mismatch repair
srim03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
srim00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CP984_30595
03430 Mismatch repair
CP984_30595
03440 Homologous recombination
CP984_30595
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
srim03032
]
CP984_30595
03400 DNA repair and recombination proteins [BR:
srim03400
]
CP984_30595
Enzymes [BR:
srim01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CP984_30595
DNA replication proteins [BR:
srim03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CP984_30595
DNA repair and recombination proteins [BR:
srim03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CP984_30595
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
QEV78734
LinkDB
All DBs
Position
6982399..6985941
Genome browser
AA seq
1180 aa
AA seq
DB search
MAKPPFTHLHVHTQYSLLDGAARLKDMFEACKEMGMTHIAMSDHGNLHGAYDFFHTAQKT
GVTPIIGIEAYVAPESRRTKRKIQWGQPHQKRDDVSGSGGYTHKTIWAANKTGLHNLFKL
SSDAYKEGWLQKWPRMDKETISQWSEGLIASTGCPSGELQTRLRLGQFDEALKSAAEYQD
IFGKDRYFLELMDHGIEIERRVRDGLLEIGKKLGIPPLVTNDSHYTYAHEATAHDALLCI
QTGKNLTDPDRFKFDGTGYYLKSTDEMYAIDSSDAWQEGCRNTLLVAEQIDTTGMFEKRD
LMPKFDIPEGFTEVTWFQEEVRRGMERRYPGGVPEDRQKQAEYEMDVIIQMGFPGYFLVV
ADFIMWAKRNGIAVGPGRGSAAGSIVAYAMGITDLDPVTHGLIFERFLNPERVSMPDVDI
DFDERRRVEVIRYVTEKYGEDKVAMIGTYGKIKAKNAIKDSARVLGYPYAMGDRITKAMP
ADVLGKGIDLDGITNPQHPRYNEAGEVRSMYENEPDVKKVIDTAKGVEGLVRQMGVHAAG
VIMSSEPIIDHAPVWVRHTDGVTITQWDYPQCESLGLLKMDFLGLRNLTIMDDALKMVKA
NKGVDLELLEVPLDDPKTFELLCRGDTLGVFQFDGGPMRSLLRQMQPDNFEDISAVSALY
RPGPMGMNSHINYAERKNGRQEITPIHPELEEPLKETLGLTYGLIVYQEQVQKAAQIIAG
YSLGEADILRRVMGKKKPEELAKNFTIFQAGARKNGYSDQAIQALWDVLVPFAGYAFNKA
HSSAYGLVTYWTAYLKANYPAEYMSALLTSVRDDKDKSAVYLNECRRMGIKVLPPNVNES
LANFAAQGDDVILFGLTAVRNVGQNVVDSIIRCRKAKGKYASFPDYLDKVDAVVCNKRTT
ESLIKAGAFDEMGHTRKGLMAHYEAMIDNVVQVKRKEAEGQFDLFGGMGDDSSDDGPGFG
LDIEFSDIEWDKTYLLAQEREMLGLYVSDHPLFGLEHVLSDKADAAISQLTGGDYSDGSI
VTIGGIISGLQRKMTKQGNAWAIATVEDLAGSIECMFFPATYQLVSTQLVEDTVVFVKGR
LDKREDIPRLVAMEMMVPDLSEAGANAPVTITIPTVKVTPPLVEKLGEVLTSHRGATEVR
IKLQGTRKTTVLRLDRHRVTPDPSLFGDLKVLLGPSCLAG
NT seq
3543 nt
NT seq
+upstream
nt +downstream
nt
gtggccaagccgcccttcacgcatctgcacgtgcacacccagtactccctgctggacggt
gccgcgcggctgaaggacatgttcgaggcgtgcaaggagatgggcatgacgcacatcgcc
atgtccgaccacggcaacctccacggcgcctacgacttcttccacaccgcgcagaagacc
ggtgtgacgccgatcatcggcatcgaggcgtatgtggcgcccgagtcgcggcgtaccaag
cgcaagatccagtggggccagccgcaccagaagcgcgacgacgtctccggttccggcggt
tacacccacaagacgatctgggcggcgaacaagaccgggctgcacaacctcttcaagctc
tcctccgacgcgtacaaggaaggctggctgcagaagtggccccggatggacaaggagacg
atctcccagtggtccgagggcctgatcgcctccaccggctgcccctccggtgagctgcag
acccggctgcgcctcggccagttcgacgaggccctgaagtcggcggccgagtaccaggac
atcttcggcaaggaccgctacttcctggagctgatggaccacggcatcgagatcgagcgc
cgggtccgcgacggcctgctggagatcggcaagaagctcggcatccccccgctggtcacc
aacgactcccactacacctacgcgcacgaggcgaccgcccacgacgccctgctgtgcatc
cagaccggcaagaacctcaccgacccggaccgcttcaagttcgacggcaccggctactac
ctgaagtccacggacgagatgtacgccatcgactcctcggacgcctggcaggagggctgc
cgcaacaccctcctggtcgccgagcagatcgacaccaccggcatgttcgagaagcgcgac
ctgatgccgaagttcgacatccccgagggcttcaccgaggtcacctggttccaggaggag
gtccgccgcggcatggagcgccgctacccgggcggcgtccccgaggaccgccagaagcag
gccgagtacgagatggacgtcatcatccagatggggttcccgggctacttcctcgtggtc
gccgacttcatcatgtgggccaagcgcaacggcatcgcggtgggccccggccgtggctcg
gcggccggctcgatcgtcgcgtacgccatgggcatcaccgacctcgacccggtcacccac
ggcctgatcttcgagcggttcctgaaccccgagcgcgtctccatgcccgatgtcgacatc
gacttcgacgagcgtcggcgcgtcgaggtgatcaggtacgtcaccgagaagtacggcgag
gacaaggtcgccatgatcggtacgtacggcaagatcaaggcgaagaacgccatcaaggac
tccgcgcgcgtgctgggctacccgtacgcgatgggcgaccgcatcaccaaggccatgccc
gccgacgtcctcggcaagggcatcgacctggacggcatcaccaacccgcagcacccccgc
tacaacgaggcgggcgaggtgcggtcgatgtacgagaacgagccggacgtgaagaaggtc
atcgacaccgccaagggcgtcgagggcctggtccggcagatgggcgtgcacgcggccggc
gtgatcatgtccagcgagccgatcatcgaccacgcccccgtctgggtgcggcacaccgac
ggcgtcaccatcacccagtgggactatccgcagtgcgagtcgctcggcctgctgaagatg
gacttcctgggcctgcgcaacctcaccatcatggacgacgccctgaagatggtgaaggcg
aacaagggcgtcgacctggagctgctggaagtcccgctggacgaccccaagaccttcgaa
ctgctctgccgcggtgacaccctcggcgtcttccagttcgacggcggcccgatgcgctcg
ctgctgcgccagatgcagcccgacaacttcgaggacatttccgccgtatcggccctgtac
cgcccgggcccgatgggcatgaactcgcacatcaactacgccgagcgcaagaacggccgc
caggagatcaccccgatccacccggagctggaggagccgctcaaggagaccctcggcctg
acctacggcctgatcgtctaccaggagcaggtgcagaaggccgcccagatcatcgccggg
tacagcctcggcgaggccgacatcctccgtcgcgtcatgggcaagaagaagcccgaggaa
ctggcgaagaacttcaccatcttccaggccggtgcccgcaagaacggctacagcgaccag
gcgatccaggccctgtgggacgtgctggtcccgttcgccggctacgcgttcaacaaggcc
cactcctccgcgtacggcctcgtcacgtactggaccgcctatctgaaggcgaactacccg
gcggagtacatgtccgcgctgctgacctcggtgcgcgacgacaaggacaagtcggcggtc
tatctgaacgagtgccgccgcatgggcatcaaggtgctcccgccgaacgtgaacgagtcg
ctggcgaacttcgccgcccagggtgacgacgtgatcctcttcggcctcaccgccgtccgc
aacgtcggccagaacgtcgtcgactcgatcatccgctgccgcaaggccaaggggaagtac
gcctccttccctgactacctcgacaaggtcgacgcggtcgtgtgcaacaagcgcaccacc
gagtccctgatcaaggcgggcgccttcgacgagatggggcacacccgcaagggcctgatg
gcgcactacgaagccatgatcgacaacgtggtgcaggtcaagcgcaaggaggccgagggg
cagttcgacctcttcggcggcatgggcgacgacagctccgacgacggccccggcttcggt
ctggatatcgagttctccgacatcgagtgggacaagacgtacctgctcgcgcaggagcgc
gagatgctcggcctgtacgtctccgaccacccgctgttcggcctggagcatgtgctgtcc
gacaaggcggacgcggcgatctcccagctgaccggcggcgactactccgacggctcgatc
gtcaccatcggcggcatcatctccggcctccagcgcaagatgaccaagcagggcaacgcg
tgggccatcgccaccgtcgaggacctggccggctccatcgagtgcatgttcttcccggcg
acctaccagctggtgtccacccaactcgtcgaggacaccgtggtcttcgtcaagggccgg
ctggacaagcgcgaggacatcccgcggctggtcgccatggagatgatggtccccgacctc
tccgaggccggcgccaacgcgcccgtgacgatcacgatccccacggtcaaggtcaccccg
ccgctggtcgagaagctcggcgaggtgctcaccagccaccgcggcgcgaccgaggtccgc
atcaagctccagggcacgcgcaagacgacggtgctccggctcgaccggcaccgggtcacg
cccgatccgtcgctcttcggcgacctgaaggtgctgctgggcccgtcctgcctggcgggg
tga
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