Streptomyces rimosus: CP984_34055
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Entry
CP984_34055 CDS
T07052
Symbol
pdxS
Name
(GenBank) pyridoxal 5'-phosphate synthase lyase subunit PdxS
KO
K06215
pyridoxal 5'-phosphate synthase pdxS subunit [EC:
4.3.3.6
]
Organism
srim
Streptomyces rimosus
Pathway
srim00750
Vitamin B6 metabolism
srim01100
Metabolic pathways
srim01240
Biosynthesis of cofactors
Module
srim_M00916
Pyridoxal phosphate biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P
Brite
KEGG Orthology (KO) [BR:
srim00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00750 Vitamin B6 metabolism
CP984_34055 (pdxS)
Enzymes [BR:
srim01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.3 Amine-lyases
4.3.3.6 pyridoxal 5'-phosphate synthase (glutamine hydrolysing)
CP984_34055 (pdxS)
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Gene cluster
GFIT
Motif
Pfam:
SOR_SNZ
ThiG
His_biosynth
IGPS
TetR_C_27
NMO
NanE
Motif
Other DBs
NCBI-ProteinID:
QEV79305
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Position
7760034..7760963
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AA seq
309 aa
AA seq
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MSTTPNATSATAAAGTPETGTARVKRGMAEQLKGGVIMDVVTPEEAKIAEDAGAVAVMAL
ERVPADIRKDGGVARMSDPDMIDGIIEAVSIPVMAKSRIGHFVEAQVLQSLGVDYIDESE
VLTPADEVNHSDKWAFTTPFVCGATNLGEALRRIAEGAAMIRSKGEAGTGNVVEAVRHLR
QIKGEIAKLRGCDNNELYAAAKELRAPFELVKEVAELGKLPVVLFSAGGVATPADAALMR
QLGAEGVFVGSGIFKSGDPAKRAAAIVKATTFYDDPKVVADVSRNLGEAMVGINCDTLPE
AERYANRGW
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
gtgtccaccacgcccaacgccacgtccgccaccgctgccgccggtacgcccgagaccgga
accgcccgcgtcaagcgcggcatggccgagcagctcaagggcggcgtgatcatggatgtc
gtcacgccggaggaggcgaagatcgccgaggacgccggcgccgtcgcggtgatggccctg
gagcgggtccccgcggacatccgcaaggacggcggcgtggcccgtatgtccgacccggac
atgatcgacggcatcatcgaggcggtgtccatccccgtgatggccaagtcgcgtatcggg
cacttcgtggaggcccaggtcctgcagtcgctcggtgtcgactacatcgacgagtccgag
gtcctcaccccggccgacgaggtcaaccactccgacaagtgggccttcaccaccccgttc
gtctgcggcgcgaccaacctgggcgaggcgctgcgccggatcgccgagggcgctgccatg
atccgttccaagggcgaggccggtaccggcaacgtcgtcgaggcggtgcgccacctgcgc
cagatcaagggcgagatcgccaagctgcgcggctgtgacaacaacgagctgtacgccgcc
gccaaggagctgcgcgccccgttcgagctggtcaaggaggtcgccgagctgggcaagctg
ccggtcgtgctgttctccgccggcggtgtggccactccggccgacgccgcgctgatgcgc
cagctcggcgccgagggcgtcttcgtgggctccgggatcttcaagtccggcgacccggcc
aagcgcgccgccgccatcgtgaaggccaccaccttctacgacgacccgaaggtcgtcgcg
gacgtctcccgcaacctgggcgaggccatggtcggcatcaactgcgacaccctccccgag
gcggagcgctacgccaaccgcggctggtga
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