Streptomyces rimosus: CP984_36185
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Entry
CP984_36185 CDS
T07052
Name
(GenBank) Y4yA family PLP-dependent enzyme
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
srim
Streptomyces rimosus
Pathway
srim00300
Lysine biosynthesis
srim00470
D-Amino acid metabolism
srim01100
Metabolic pathways
srim01110
Biosynthesis of secondary metabolites
srim01120
Microbial metabolism in diverse environments
srim01230
Biosynthesis of amino acids
Module
srim_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
srim00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
CP984_36185
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
CP984_36185
Enzymes [BR:
srim01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
CP984_36185
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
QEV79663
LinkDB
All DBs
Position
complement(8240401..8241933)
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AA seq
510 aa
AA seq
DB search
MDVPLYLEPRLESRLASLLRARTFLHMLAGGLGSPLNVVLPDRIAENLAAFRAVYRRHHL
GGVIHFAHKANRSSALVRRLAATDAGMDVASLGELQHALGSGFAPDRILATGPKNTEFLW
LAARSGTAVHIDSPGELDALAALVRDHGLPRVRILLRLSGFRAPGVRLLTRQSRFGTAEG
DLDGLLKSVERHGDAVELTGVGYHLDTTSPAEKAVALEGCVKALDTCRARGFTPRAVDIG
GGFGTDYLADGGQWQRYTTELTNAALGTRPPMTWRRHTYGLRNENGTLRGALALYPAHRP
TAGAQYLDALLSLPAPSLGRPLATLLLENLYELHTEPGRALVDQCGVTLARVLEVRRTQA
TEGEPASCDRASLDHLLVRLDANADDIGLEEHGVLVDPVLVPRDARPGPDSGPVAVYLAG
NLCLEADMITRRAVHLPAAPRPGDLLAFANTAGYCMDFSADEAQQQPVARKVAVWQEGAA
DGPGQEDAPWHWCLDEQYWPHLSRRTKGTA
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atggacgttcccttgtacctggaaccgcggttggagtcccggctggcttccctgctgcgc
gcaaggacgtttctccatatgctcgccggcgggctcgggtcgccgctgaacgtggtgtta
ccggaccggatcgccgagaacctcgccgcctttcgggccgtctaccgccgccaccacctc
ggcggcgtcatccacttcgcgcacaaggcgaaccggtccagcgccctggtgcggcggctc
gccgccaccgacgcggggatggacgtggcgtcgctcggcgagctccagcacgcgctgggg
tccgggttcgcaccggaccgcatcctggcgaccgggccgaagaacacggaattcctgtgg
ctggcggcccgctccggcaccgccgtccacatcgacagcccgggggaactggacgcgctc
gccgcgctcgtacgggaccacggcctcccccgcgtccgcatcctgctgcggctctccggc
ttccgtgcccccggcgtcaggctgctcacccggcagagccgcttcggtacggccgaaggc
gacctggacggcctgctcaagtcggtcgaacggcacggtgacgcggtggagctgaccggg
gtgggctaccacctcgacaccaccagcccggccgagaaggcggtcgccctcgaagggtgc
gtcaaggccctggacacctgccgcgcccggggcttcacgccgcgtgccgtggacatcggc
ggcggcttcggcacggattacctcgccgacggcgggcagtggcagcgctacaccaccgag
ctgaccaacgccgcgctgggcacccgcccgcccatgacctggcgccgccacacctacggc
ctgcgcaacgagaacggcaccctgcgcggtgccctggccctgtacccggcccaccgcccg
accgccggcgcccagtacctcgacgccctcctgtcgctccccgccccctcgctgggccgc
ccgctggccaccctgctgctggagaacctgtacgagctgcacaccgagccgggccgggcg
ctggtggaccagtgcggggtcaccctggcgcgggtgctggaggtacgccgtacacaagcc
accgagggcgagcccgctagttgcgaccgcgcgtctctcgaccacctcctcgtgcgtctg
gacgcgaacgccgacgacatcgggctggaggagcacggcgtcctcgtcgaccccgtcctc
gtaccgcgcgacgcgcggccgggcccggacagcggccccgtggcggtctacctcgcgggc
aacctgtgcctggaggccgacatgatcacccggcgcgcggtccacctgccggccgcgccg
cgccccggcgacctgctggcgttcgccaacaccgccggatactgcatggacttcagcgcc
gacgaggcgcagcagcagcccgtcgcccgcaaggtcgccgtatggcaggagggggcggcg
gacggacccggccaggaggacgcgccctggcactggtgcctggacgagcagtactggccg
cacctatcacgccggacgaaagggactgcatga
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