Streptomyces rochei: SRO_0909
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Entry
SRO_0909 CDS
T06265
Name
(GenBank) lysine--tRNA ligase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
srj
Streptomyces rochei
Pathway
srj00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
srj00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
SRO_0909
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
srj01007
]
SRO_0909
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
srj03016
]
SRO_0909
Enzymes [BR:
srj01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
SRO_0909
Amino acid related enzymes [BR:
srj01007
]
Aminoacyl-tRNA synthetase
Class II (A)
SRO_0909
Transfer RNA biogenesis [BR:
srj03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
SRO_0909
Prokaryotic type
Other AARSs
SRO_0909
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
LPG_synthase_C
tRNA-synt_2
tRNA-synt_2_TM
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
BBC92085
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All DBs
Position
complement(976829..980098)
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AA seq
1089 aa
AA seq
DB search
MTATAEPAARRDGAGEHPPAGGGRLGRVPEAFGGLFAALGLLCAAIALVEPLRRVLRPLV
RGIDLLLVPISANLAYAVFLFLLAGATAARKKVAWWLVVVYLGLLVLSDALGLALGLYAQ
SLPSLIPCGLLLALLLVARGEFYAASRRGAVWRALAVLLGGLAVAILLGWGLVLLFPGTL
PADEHLAWAADRVCGGLVSSSSFAGHPPRAVTFVLGLLGALALLNAAATLFRSQRLEAAL
HGDEEARVRALLARYGDRDSLGYFATRRDKAVVFSPSGKAAVTYRVEVGVCLASGDPVGD
PEAWPHAIAAWLDLARRYAWVPAVMGASEDGARAYARAGLGALQLGDEAILHVAGFDLDG
RDMRVTRQAVHRVRRTGATCRIRRHAALGEREMEEIVDRADAWRDTETERGFSMALDRLG
DPADGDCLLVEACGEDRRLLALLSFVPWGTDGVSLDLMRRDRAAPNGVMEFMVTELCAAA
PKLGIRRISLNFAVFRSVFEEGARIGAGPVLRLWRRLLLFFSRWWQLEALYRSNAKYHPE
WYPRFICYGETASLARIGLASGIAEGFVPVPSLRTLWGKGHRTTGRPPAPLTPPLTTAPA
PDTGAAPADPDAGLPDQVRVRHHKLDRLRAEGTDPYPVGVRPPTHALADVPPGERVTVAG
RIMLVRDLGGIVFAVLRDWSGDHQIALTREGCGAALARFTADADIGDHITVTGTSGLSDR
GEPTVFATAWQLTGKCLRPLPDKRRGLTDPEARVRLRHLDLVTRPSARAVLRARSAAVGA
LRQGLLGRGYVEVETPVLQRIHGGANARPFTTHSNAYDLDLYLRIAPELYLKRLCVGGLE
KVFELGRTFRNEGVSPKHNPEFTMLEAYQAYADYDVMLDLARELIQGAATAAHGAPVARR
GTEEYDISGPWPVKTVYGALSEALGEEIGPGTELLRLHRLCDRAKVPYTADDQPADVVLE
MYERLVEERTQLPTFYKDFPTAVSPLTRQHRTDPRLAERWDLVAFGTELGTAYSELTDPV
EQRRRLTEQSLRAAGGDPEAMELDEDFLQALDYAMPPTGGLGLGVDRLVMFLTGLTIRET
LPFPLVRRR
NT seq
3270 nt
NT seq
+upstream
nt +downstream
nt
atgaccgccaccgcggagcccgccgcacgcagggacggcgcgggggagcaccccccggcc
ggcggcgggcggctcggccgggtgcccgaggcgttcggggggctgttcgccgcactgggg
ctgctgtgcgccgcgatcgcgctggtggagcccctgcgccgggtgctgcgtccgctcgtc
cggggcatcgatctgctgctggtccccatcagcgccaacctcgcctacgcggtcttcctg
ttcctgctggccggggccaccgccgcccgcaagaaggtcgcctggtggctggtcgtcgtc
tacctgggcctgctcgtcctcagcgacgcgctcggcctcgccctcggcctgtacgcccag
tccctgccctccctgatcccgtgcggcctgctgctggccctgctgctggtggcccggggc
gagttctacgccgcctcccgccgcggcgcggtgtggcgcgccctcgccgtgctgctcggc
gggctcgccgtcgcgatcctgctcggctggggtctggtcctgctgttcccgggcaccctc
ccggccgacgagcacctggcctgggccgccgaccgggtctgcggcggcctcgtctccagc
agctccttcgccggacacccgccccgcgcggtcaccttcgtgctcggcctgctcggcgcc
ctcgccctgctcaacgcagccgccacactgttccgttcgcagcgcctggaggccgccctg
cacggcgacgaggaggcccgcgtccgcgccctgctcgcgcgttacggcgaccgcgactcg
ctcggctacttcgccacccgccgcgacaaggccgtcgtcttctcgcccagcggcaaggcc
gccgtcacctaccgcgtcgaggtcggggtgtgcctggccagcggcgatcccgtcggcgac
ccggaggcctggccgcacgccatcgccgcctggctggatctggcccgccgctacgcctgg
gtgcccgccgtgatgggcgcctccgaggacggcgcccgcgcctacgcccgcgcgggcctc
ggcgccctccagctcggcgacgaggcgatcctgcacgtcgccgggttcgatctggacggc
cgggacatgcgcgtcacccggcaggccgtgcaccgggtccgccgcaccggcgccacctgc
cgcatccgccgccacgccgcgctcggcgaacgggagatggaggagatcgtcgaccgggcc
gacgcctggcgcgacaccgagaccgaacgcggcttctccatggccctggaccgcctcggc
gaccccgccgacggcgactgcctgctcgtcgaggcctgcggcgaggaccgccgactgctc
gcgctgctctccttcgtgccctggggcaccgacggcgtctccctggacctgatgcgccgc
gaccgcgccgcgcccaacggcgtgatggagttcatggtcaccgaactgtgcgccgccgca
ccgaagttgggcatccgcaggatctccctgaacttcgccgtgttccgctcggtcttcgag
gagggcgcccggatcggcgccgggcccgtcctgcggctctggcgccggctgctgctgttc
ttctcccgctggtggcagctggaggccctgtaccgctccaacgccaagtaccaccccgag
tggtacccgcgcttcatctgctacggcgagaccgcctccctcgcccggatcggcctggcc
tccggcatcgccgagggcttcgtccccgtaccgtccctgcgcaccctgtggggcaagggg
caccgcacgaccggccggccgcccgcgcccctcaccccgccgctcacgaccgcgcccgcc
ccggacaccggcgcagcgcccgccgacccggacgcggggctgcccgaccaggtccgcgtc
cgccaccacaagctcgaccggctgcgcgccgagggcaccgacccctaccccgtcggggtc
cgccccccgacccatgccctcgccgacgttccgcccggcgagcgggtcaccgtcgccggg
cggatcatgctggtccgcgacctcggcgggatcgtcttcgccgtgctccgcgactggtcc
ggcgaccaccagatcgccctcacccgcgagggctgcggcgccgccctcgcccgcttcacc
gccgacgccgacatcggcgaccacatcaccgtcaccgggacgagcggcctcagcgaccgg
ggcgagcccaccgtcttcgccaccgcctggcagctcaccggcaagtgcctgcgcccgctg
cccgacaagcgccggggcctgaccgaccccgaggccagggtccggctgcgccacctcgac
ctggtcacccggcccagcgcccgtgccgtgctccgcgcccgctccgccgccgtcggagcc
ctgcgccagggactgctcggccgcggctacgtcgaggtcgagaccccggtgctccagcgg
atccacggcggcgccaacgcccgtcccttcaccacccacagcaacgcctacgacctcgat
ctgtatctgcgcatcgcccccgagctgtacctcaagcggctgtgcgtggggggcctggag
aaggtcttcgaactcggccgcaccttccgcaacgagggcgtgtcgcccaagcacaacccc
gagttcaccatgctggaggcgtatcaggcgtacgccgactacgacgtgatgctcgacctc
gcccgcgaactgatccagggcgccgccaccgccgcccacggcgccccggtggcccgcaga
ggcaccgaggagtacgacatctccgggccctggccggtgaagacggtctacggcgccctg
tccgaggccctcggcgaggagatcggccccggcaccgaactgctgcgcctgcaccggctg
tgcgaccgcgccaaggtgccgtacacggcggacgaccaacccgccgacgtcgtcctggag
atgtacgagcgcctggtcgaggagcgcacccaactgcccaccttctacaaggacttcccg
accgccgtctccccgctgacccggcagcaccgcaccgacccccggctcgccgaacgctgg
gacctcgtcgccttcggcaccgaactcggcaccgcctactccgagttgaccgaccccgtc
gaacagcgccgcaggctcaccgagcagtcgctgcgggcggcgggcggtgacccggaggcc
atggaactggacgaggacttccttcaggccctggactacgcgatgcccccgaccggcggc
ctcggcctcggcgtcgaccggctcgtcatgttcctcaccggcctcacgatccgggagacc
ctgccgttcccgctggtgcgccgccgctga
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