Streptomyces rochei: SRO_1437
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Entry
SRO_1437 CDS
T06265
Name
(GenBank) DNA-3-methyladenine glycosylase 2 family protein
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
srj
Streptomyces rochei
Pathway
srj03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
srj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SRO_1437
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
srj03000
]
SRO_1437
03400 DNA repair and recombination proteins [BR:
srj03400
]
SRO_1437
Enzymes [BR:
srj01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
SRO_1437
Transcription factors [BR:
srj03000
]
Prokaryotic type
Helix-turn-helix
AraC family
SRO_1437
DNA repair and recombination proteins [BR:
srj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
SRO_1437
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HhH-GPD
HTH_AraC
DUF6233
Motif
Other DBs
NCBI-ProteinID:
BBC92613
LinkDB
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Position
complement(1604812..1606299)
Genome browser
AA seq
495 aa
AA seq
DB search
MQTATHFDREHCVRAVQSKDARFDGWFYTAVLTTRIYCRPSCPVVPPKPGNMTFYPSAAA
CQQAGFRACKRCRPDTSPGSPEWNQRADLVARAMRLITDGVVDREGVPGLAARLGYSTRQ
VERQLLAELGAGPLALARAQRAQTARLLIETTPLPMAEIAFAAGFSSIRAFNDTVREVFA
LSPSELRRRVPAGRAAGETTPGTLSLRLPFRAPLNPDNLFGHLAATAVPGVEEWRDGAYR
RTLRLPYGHGIAALAPRPDHIACRLTLSDLRDLAVAISRCRRMLDLDADPVAVDDRLRTD
PLLAPLVDKAPGRRVPRTVDEAEFAVRAVLGQQVSTAAARTHAGRLVTAHGTPVDDPEGG
LTHLFPSPQALAALNPDTLAMPRTRRATFTTLVGQLADGTLHLGVESDWAEARARLLALP
GFGPWTVDVIAMRAFGDPDAFLPTDLGIRRAAAELGLPSTPAALIARAEAWRPWRAYAVQ
YLWATDSHPINFLPV
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atgcagacagcgacgcacttcgaccgggagcattgtgtgcgtgccgtgcagtcgaaggac
gcgcggttcgacggttggttctacacggccgtgctgaccacccggatctactgccggccc
agctgccctgtggttccgcccaagcccgggaacatgacgttctacccgagcgcggccgcc
tgccagcaggccgggttccgcgcctgcaagcgctgccgcccggacacgagtcccggctcc
ccggagtggaaccagcgcgctgatctggtggcccgtgcgatgcgcctgatcacggacggg
gtcgtggaccgtgagggtgtgccgggcctggccgcccggctcggttacagcacccgccag
gtcgagcggcagctgctcgccgagctgggcgcgggcccgttggcgctggcccgcgcccag
cgcgcccagaccgcccggctgctcatcgagaccacgccgctgcccatggcggagatcgcc
ttcgcggccggtttctcctccatccgcgccttcaacgacaccgtccgcgaggtcttcgcg
ctgtcccccagtgagctgcgccggcgggtgccggccgggcgggcggcgggcgagaccacc
ccgggcaccctgtccctgcggctgccgttccgtgccccgctcaacccggacaacctcttc
ggccacctcgccgccaccgccgtaccgggcgtggaggagtggcgggacggtgcgtaccgt
cgcacgctgcggctgccgtacgggcacgggatcgccgccctcgccccgcgcccggaccac
atcgcctgccggctcaccctcagcgacctgcgcgacctggccgtggcgatcagccgctgc
cgccggatgctggacctggacgccgacccggtcgcggtcgacgaccggctgcgcaccgat
ccgctgctggcccccctggtcgacaaggcaccgggccgccgggtgccccgcacggtggac
gaggccgagttcgcggtacgggccgtactcggccagcaggtgtcaacggccgccgcccgc
acccacgccggccgcctcgtcaccgcgcacggcacacccgtggacgatcccgagggcggc
ctcacccacctcttcccctcgccccaggcactggccgcccttaaccccgacaccctggcc
atgccccgcacccggcgcgccaccttcaccacgctggtgggtcaactcgccgacggcacc
ctccacctgggagtggagtcggactgggcggaggcccgggcccggctgctcgcgctgccc
gggttcgggccctggacggtcgatgtcatcgccatgcgtgccttcggtgatccggacgcg
ttcctgccgaccgacctcggtatccgccgcgcggccgccgagctggggctgccgtcgacg
cccgcggcgctgatcgcgcgtgcggaggcatggcgtccgtggcgggcgtacgcggtgcag
tatctgtgggcgaccgacagccacccgatcaacttccttcctgtgtaa
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