Streptomyces rochei: SRO_2484
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Entry
SRO_2484 CDS
T06265
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
srj
Streptomyces rochei
Pathway
srj00300
Lysine biosynthesis
srj00470
D-Amino acid metabolism
srj01100
Metabolic pathways
srj01110
Biosynthesis of secondary metabolites
srj01120
Microbial metabolism in diverse environments
srj01230
Biosynthesis of amino acids
Module
srj_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
srj00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
SRO_2484
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
SRO_2484
Enzymes [BR:
srj01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
SRO_2484
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
NBD_C
Motif
Other DBs
NCBI-ProteinID:
BBC93660
LinkDB
All DBs
Position
complement(2818112..2819503)
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AA seq
463 aa
AA seq
DB search
MSRSAHPAGPRHADVLPEGHYSAPPTDLNVLDHKVWARTVGRGEDGVVTVGGVPVTRLAE
EFGTPAYIMDEADFRARARAWRTAFGADADVFYAGKAFLSRAVVRWLEEEGLNLDVCSGG
ELVTALSAGMAPERIAFHGNNKSVAEITRAVEAGVGRIVLDSFQEIVRVAHIAQSLGKRQ
KVQIRITVGVEAHTHEFIATAHEDQKFGIPLAGGQAAEAVRRALHLDGLELIGIHSHIGS
QIFDMSGFEVAAHRVVGLLKDIRDEHGVELPEIDLGGGLGIAYTSDDDPREPHEIAKALG
EIVGRECEAARLRTPRISVEPGRAVVGPTAFTLYEVGTVKPLEGLRTYVSVDGGMSDNIR
TALYDAEYSVALVSRASDAEPMLVRVVGKHCESGDIVVKDAFLPADLAPGDLIAVPATGA
YCRSMASNYNHVLRPPVVAVKDGEARVIVRRETEEDLLRLDVG
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgagccgttccgcccatcccgccgggccccgtcacgccgacgtcctgcccgaggggcac
tactccgcgccgcccaccgacctcaacgtgctcgaccacaaggtctgggcgcggaccgtc
ggccgcggcgaggacggggtcgtcaccgtcggcggggtccccgtgacccggctcgccgag
gagttcggcacgcccgcgtacatcatggacgaggccgacttccgggcgcgggcgcgcgcc
tggcgcaccgccttcggggccgacgccgatgtgttctacgcggggaaggcgttcctctcg
cgtgccgtcgtgcggtggctggaggaggaagggctgaatctcgatgtttgttccgggggc
gagctcgtaacggcgctctccgccgggatggctcccgagcgcatcgccttccacgggaac
aacaagtccgtcgcggagatcacccgcgccgtggaggccggcgtcgggcggatcgtgctc
gactccttccaggagatcgtgcgggtcgcccacatcgcccagtccctgggcaagcggcag
aaggtccagatccggatcaccgtcggcgtcgaggcccacacccacgagttcatcgccacc
gcccacgaggaccagaagttcggcatcccgctcgccggcgggcaggccgccgaggccgtg
cggcgggcgctgcacctggacgggctcgaactgatcgggatccactcccacatcggctcg
cagatcttcgacatgtccgggttcgaggtcgccgcccaccgggtcgtcggactgctcaag
gacatccgcgacgagcacggcgtcgagctgcccgagatcgacctcggcggcggcctcggc
atcgcctacaccagcgacgacgacccgcgcgagccgcacgagatcgccaaggcgctcggc
gagatcgtcggccgcgagtgcgaggccgcgcggctgcgcacgccccggatctcggtcgag
cccgggcgcgccgtcgtcggcccgaccgcgttcacgctctacgaggtcggcaccgtgaag
ccgctggaggggctgcgcacgtacgtctccgtcgacggcggcatgtccgacaacatccgc
accgcgctgtacgacgccgagtacagcgtcgccctcgtctcgcgggccagcgacgccgag
ccgatgctcgtccgggtcgtgggcaagcactgcgagagcggggacatcgtggtcaaggac
gcgttcctgcccgccgatctcgcgccgggcgacctcatcgccgtaccggccacgggggcg
tactgccggtcgatggccagcaactacaaccatgtgctccggccgcccgtcgtcgcggtg
aaggacggcgaggcccgtgtgatcgtccggcgggagacggaggaggatctcctgcgtctg
gatgtcggatga
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