Streptomyces rochei: SRO_2572
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Entry
SRO_2572 CDS
T06265
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
srj
Streptomyces rochei
Brite
KEGG Orthology (KO) [BR:
srj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
srj03021
]
SRO_2572
Transcription machinery [BR:
srj03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SRO_2572
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
HTH_23
PF0610-like_N
DUF7343
Sigma70_ECF
MarR_2
NirdL-like_HTH
HTH_24
IF2_N
MarR
HTH_3
HTH_Crp_2
GerE
HTH_AraC
HTH_ParB
Motif
Other DBs
NCBI-ProteinID:
BBC93748
LinkDB
All DBs
Position
2907573..2908676
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AA seq
367 aa
AA seq
DB search
MRDEERGTRELPTGDGGAPWSSAAETSGENPRDGSRRMADGIDGIPEQARPHPEDHSAGP
GGAGAGPDTSPEASGGAAPAGRAGARARGRATGGTMSEHERYADDGALSAEAAPHDPHDR
SGARAMFVELRGLDTGSTEYAELRNQLVRMHLPLVEHLARRFRNRGEPLDDLTQVATIGL
IKSVDRFDPERGVEFSTYATPTVVGEIKRHFRDKGWAVRVPRRLQELRLALTTATAELSQ
LHGRSPTVHELAEKLAISEEEVLEGLESANAYSTLSLDVPDTDDESPAVADTLGAEDEAL
EGVEYRESLKPLLEDLPPREKRILLLRFFGNMTQSQIAQEVGISQMHVSRLLARTLAQLR
EKLLVEE
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
gtgcgggacgaagagcgcggcacgcgtgagctgccgaccggggacgggggtgccccctgg
tcgagtgcggcggagacctccggggagaacccccgcgacggttcccggcgcatggcggac
ggcatcgacggcatccccgagcaggccaggccacacccggaggaccactccgcagggccc
ggcggtgcgggcgcaggccccgacacctcacccgaggcgagcggcggggccgctcccgcc
ggccgcgcgggggcgagggctcggggaagggctacgggcgggacgatgagcgagcacgag
cgatacgcggacgacggcgcgctgagcgcggaggccgcaccgcacgacccgcacgaccgc
agcggggcccgtgcgatgttcgtcgaactgcgcgggctcgacacgggcagcacggagtac
gcggagctgcgcaatcagctggtccgcatgcatctgccgctggtggagcacctggcgcgc
cggttccgcaaccgcggcgagccgctggacgacctcacccaggtcgccacaatcggtctg
atcaagtccgtggaccggttcgacccggagcggggcgtggagttctccacgtacgccacg
ccgaccgtggtcggcgagatcaagcggcacttccgggacaagggctgggcggtccgggtg
ccgcgccgcctccaggagctgcggctcgcgctgaccacggcgacggcggagctgtcccag
ctgcacggccgctcgccgacggtgcacgaactggcggagaagctcgcgatctccgaggag
gaggtcctggagggcctggagtcggcgaacgcgtactccacgctgtccctggacgtcccc
gacaccgacgacgagtcccccgcggtcgccgacacgctcggcgcggaggacgaggcgctg
gagggggtggagtaccgggagtcgctcaagccgctgctggaggatctgccgccgcgggag
aagcggatcctgctgctgcgtttcttcgggaacatgacgcagtcccagatcgcgcaggag
gtcgggatctcccagatgcacgtctcccggctgctggcgcgcacactggcgcagctgcgg
gagaagctgctggtggaggagtag
DBGET
integrated database retrieval system
