Streptomyces rochei: SRO_2623
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Entry
SRO_2623 CDS
T06265
Name
(GenBank) ATP-dependent DNA helicase UvrD2
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
srj
Streptomyces rochei
Pathway
srj03420
Nucleotide excision repair
srj03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
srj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SRO_2623
03430 Mismatch repair
SRO_2623
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
srj03400
]
SRO_2623
Enzymes [BR:
srj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SRO_2623
DNA repair and recombination proteins [BR:
srj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SRO_2623
MMR (mismatch excision repair)
Other MMR factors
SRO_2623
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
HRDC
UvrD_C_2
AAA_30
DUF6011
C1_1
Viral_helicase1
Zn_ribbon_TiaS
Motif
Other DBs
NCBI-ProteinID:
BBC93799
LinkDB
All DBs
Position
complement(2958606..2960813)
Genome browser
AA seq
735 aa
AA seq
DB search
MTAATHSPLFPQVPAVPDSADAVLEGLDPEQREVATALRGPVCVLAGAGTGKTRAITHRI
AYGVRSGILQPASVLAVTFTNRAAGEMRGRLRQLGAQGVQARTFHSAALRQLQYFWPKAV
GGSLPRLVDRKIQLVADAAAGLGTRLDRGELRDVTGEIEWCKVTQTIPADYPYAAAKAGR
EAPRDPTEIAHLYAAYEDLKRDRAVIDFEDVLLLTVAVLQDRQDIAEQVRAQYQHFVVDE
YQDVSPLQQRLLDLWLGDRDDLCVVGDASQTIYSFTGATPDHLLDFRARHPGATVVKLVR
DYRSTPQVVRLANGLLAQAHGRAADHRLELVSQRPSGPEPGYTEYTDEPAEAEGAARRIR
ELIDAGVPAAEIAVLFRTNSQSETYEQALADAGVPYQLRGAERFFDRPEVRKAGLALRGA
ARFGGNDSRLDDVVDLPSQVRAVLSGEGGWTIQPPAGSGAVRERWESLTALVNLAQDLAA
ARPGATLTDFVAELDERAAAQHAPTVQGVTLASLHAAKGLEWDAVFLVGVAEGMLPITYA
RTDEQIEEERRLLYVGVTRARERLHVSWSLSRSPGGRHNRRPSRFLYGLRPGTTPTVGRS
AGSVGGVERGIRGVDATAVPRRAQRTPARCRVCGRTLTDAGEMKLMRCEDCPSDMDEGLY
ERLRAWRAVQAANSGQPDFCVFTDRTLMAIAENRPDSPAELSRIPGVLSRKLRSYGAEVL
AICAGQELDGEIAVD
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
gtgacagcagcaacgcactcccccctcttcccgcaggtaccggccgtccctgactcggcc
gacgcggtgctcgaagggctcgaccccgagcagcgcgaggtggccaccgccctgcgcgga
ccggtgtgcgtgctggccggcgcgggcaccggcaagacccgggcgatcacccaccgcatc
gcctacggggtgcgctccggcatcctccagcccgccagcgtgctcgccgtcaccttcacc
aaccgcgccgcgggcgagatgcgcggccggctgcgccagctcggcgcccagggcgtccag
gcccgcaccttccactccgcggcactgcgccagctccagtacttctggccgaaagccgtc
ggtggcagcctgccccggctggtcgaccgcaagatccagctcgtcgccgacgcggccgcc
ggactcggcacccggctcgaccgcggcgagctgcgcgatgtcaccggcgagatcgaatgg
tgcaaggtcacccagaccatccccgccgattatccgtacgctgccgcgaaggccggccgc
gaggccccccgcgaccccaccgagatcgcacatctgtacgcggcctacgaggacctcaaa
cgcgaccgcgcggtgatcgacttcgaggacgtcctgctgctcaccgtcgccgtcctccag
gaccgccaggacatcgccgaacaggtccgcgcccagtaccagcacttcgtggtggacgag
taccaggacgtcagccccctccagcagcgcctgctggacctgtggctcggcgaccgcgac
gacctgtgcgtggtcggcgacgccagccagaccatctactcgttcaccggagcaacgccc
gaccatctgctcgacttccgcgcccgccaccccggcgccaccgtcgtcaagctggtccgc
gactaccgctccaccccccaggtcgtccgcctcgccaacggactgctcgcccaggcccac
ggccgcgccgccgaccaccggctggaactcgtctcccagcgcccctcgggacccgaaccc
ggctacaccgagtacaccgacgagcccgccgaggccgaaggcgccgcccgccgcatccgc
gagctgatcgacgccggcgtcccggccgccgagatcgccgtcctgttccgcaccaactcc
cagtccgagacctatgagcaggcgctcgccgacgccggtgttccctaccagctgcgcggc
gccgagcgcttcttcgaccggcccgaggtgcgcaaggccggcctcgccctgcgcggcgcc
gcccgcttcgggggcaatgactcccgcctggacgacgtcgtggacctgccctcccaggtg
cgcgccgtgctgtcgggggagggcggctggaccatccagccgccggccggctccggcgcc
gtcagagagcgctgggagtccctcaccgccctggtcaacctcgcccaggacctcgccgcc
gcccgccccggcgccaccctcaccgacttcgtcgccgaactggacgagcgggcggccgcc
cagcacgccccaaccgtccagggcgtcaccctggcctccctgcacgcggccaagggcctg
gaatgggacgccgtcttcctggtgggcgtcgccgagggcatgctgcccatcacctacgcc
aggaccgacgaacagatcgaggaggaacgccgcctcctgtacgtcggggtcacccgcgcc
cgtgaacgcctccatgtctcctggtccctgtcccgctcacccggcggccgccacaaccgc
aggcccagccgcttcctctacggactgcgccccggcaccacccccaccgtcggccgcagc
gccgggtccgtcgggggcgtcgagcgcggcatccggggcgtggacgccaccgcggtgccc
cggcgcgcccagcgcaccccggcccgctgccgggtctgcggccgcaccctcaccgacgcc
ggcgagatgaagctgatgcgctgcgaggactgcccctccgacatggacgaggggctctac
gagcggctgcgcgcatggcgcgccgtccaggccgcgaacagcgggcagccggacttctgc
gtcttcaccgaccgcaccctgatggccatcgccgagaaccgcccggacagccccgccgag
ctctcccgcatccccggcgtcctcagtcgcaagctgcgcagctatggagccgaagtcctg
gccatctgcgcaggtcaggagcttgatggtgagatcgcggtggactga
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