Streptomyces rochei: SRO_2627
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Entry
SRO_2627 CDS
T06265
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
srj
Streptomyces rochei
Pathway
srj03420
Nucleotide excision repair
srj03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
srj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SRO_2627
03430 Mismatch repair
SRO_2627
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
srj03400
]
SRO_2627
Enzymes [BR:
srj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SRO_2627
DNA repair and recombination proteins [BR:
srj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SRO_2627
MMR (mismatch excision repair)
Other MMR factors
SRO_2627
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
AAA_30
UvrD_C_2
Motif
Other DBs
NCBI-ProteinID:
BBC93803
LinkDB
All DBs
Position
complement(2963879..2967361)
Genome browser
AA seq
1160 aa
AA seq
DB search
MPAHLTDPEQLKELLGIPFTPEQTACITAPPAPQVIVAGAGSGKTTVMAARVVWLAGTGQ
VAPEQVLGLTFTNKAAGELAERVRKALVKAGVTDPDTIDPDNPPGEPVISTYHSFAGRLL
TDHGLRIGLEPASRLLADATRYQLAARVLREAPGPYPALTRSFADLVSDLLALDSELSEH
LVEPGELRAWDADLLTTLQDAKLSNAELRKVPETATARRELAALVQRYRTAKRERDLLDF
GDQIALSARLATLPEVGRLLREEFRVVLLDEYQDTSVAQRVLLAGLFGSGSGHPVTAVGD
PCQAIYGWRGASVANLDDFPDHFRHADGSPATRQALSENRRSGGRLLDLANGLAAPLRAL
HEGVEALRPAPGAERDGLVRCALLPTHAEELDWLADSVAHLVRTGTAPGEIAVLCRTAAD
FAAIQGALVAREVPVEVVGLSGLLHLPEVADLVAVCEVLQDPGANASLVRLLTGPRWRIG
PRDLALLGRRARLLVAHAGAADTGDPDRRLAAAVEGTDPAEVISLADALDTFLDAHGGDE
DGLPFSPDARVRFARLATDLRDLRRALSDPLMDVLHRVLAVTGLEVELSASPGALAARRR
ETLANFLDVAAAFAAGDGEATLLAFLGFLRTAVQYEKGLDNALPGGENTVKVLTAHKSKG
LEWDVVAVPGLVTGTFPSAQGRDKWTAQAKVLPHALRGDAATLPDVDGWDARGMKAFHEA
MKEHQHTEELRLGYVTFTRPRSLLLGSGHWWGPSQKKKRGPSDFLQELYAHCAAGHGEIE
VWAEEPADDEENPALREPDADLAWPLPLDADALARRRAAAETVLAHLDTLPATGPAPADP
ATHEDPDWPTPPEEPPYEEPYEEPPYDGPDEESPYDEVDDGPPYEDPSGAGPRHEPYGDD
PHTGAPVIPHQAPAPAEPGPRSDLTPEESRLIASWDRDLDALAGELLLARRAVTDVPLPA
TLTATQLLRLAEDPDGLAQELARPMPRPPQRAARRGTRFHAWVESRYEELALPLLEPDEL
PGADAEIADEEDLEALKEAFERTEYARRTPYRVEEPVQVVLAGRVVRGRIDAVYREGEGA
SATYEIVDWKTGREHTADPLQLAVYRLAWAEQQGVPLHAVTATFLYVRTGEAVRPRDLPG
RAALERLLTDGAGPPTARAT
NT seq
3483 nt
NT seq
+upstream
nt +downstream
nt
atgcccgcccatctcaccgatcccgagcagctcaaggagctcctcggcatccccttcacc
ccggagcagacggcctgcatcaccgcgccgcccgccccgcaggtgatcgtggccggtgcc
ggttcgggcaagacgacggtgatggcggcccgcgtggtctggctggccggcaccggacag
gtcgcccccgagcaggtcctcgggctgaccttcaccaacaaggccgcgggcgaactggcc
gagcgcgtccgcaaggcactcgtcaaggcgggcgtcaccgaccccgacacgatcgacccg
gacaaccccccgggcgagccggtcatctccacgtaccactccttcgccggccgcctcctc
accgaccacggcctgcgcatcggcctggagcccgcctcccgcctcctcgccgacgccacc
cgctaccagctcgccgcccgcgtgctgcgcgaggcccccggcccctacccggcgctcacc
cgctccttcgccgacctggtcagcgatctgctcgccctggactccgaactctccgaacac
ctggtggaacccggcgaactgcgggcctgggacgccgatttgctgaccaccctccaggac
gccaagctcagcaacgccgaactgcgcaaggtccccgagaccgccaccgcccgccgcgaa
ctcgccgcactggtccagcgctaccgcaccgccaaacgcgaacgcgacctgctcgacttc
ggcgaccagatcgccctgtccgcccgcctcgcgaccctgcccgaggtgggccgtctgctg
cgcgaggagttccgggtggtcctcctggacgagtaccaggacacctccgtcgcccaacgc
gtcctgctcgcgggcctgttcggatccggcagcggccacccggtgaccgccgtgggcgac
ccctgccaggccatctacggctggcgcggcgcctccgtcgccaacctggacgacttcccc
gaccacttccgccatgccgacggcagccccgccacccgccaggcgctcagcgagaaccgc
cgcagcggcggccgcctcctcgacctcgccaacggactcgccgcccccctgcgcgccctg
cacgagggcgtcgaggccctgcgcccggcccccggcgccgagcgcgacggcctggtccgc
tgcgccctgctgcccacccacgccgaggagctggactggctcgccgactccgtcgcccac
ctcgtgcgcaccggcaccgcacccggtgagatcgccgtcctgtgccgtacggccgccgac
ttcgccgcgatccagggcgcgctggtcgcccgggaggtccccgtcgaggtggtcggcctg
tccgggctgctgcacctgcccgaggtcgccgacctggtcgccgtctgcgaggtcctccag
gaccccggcgccaacgcgagcctggtacggctgctgaccggcccccgctggcgcatcggc
ccccgcgatctcgccctcctcggccgccgcgcccgcctgctggtcgcccacgcgggcgcc
gctgacaccggtgacccggaccgccggctcgccgccgccgtggagggcaccgacccggcc
gaggtgatatcgctcgccgacgccctggacaccttcctggacgcccacggcggggacgag
gacgggctgcccttctccccggacgcccgggtgcgcttcgcccgcctcgccaccgacctg
cgcgatctgcgccgcgcgctgtccgacccgctgatggacgtcctgcaccgcgtcctcgcc
gtcaccggcctggaggtggagctgtcggcgtccccgggcgccctggccgcccgccgccgc
gagaccctcgccaacttcctcgatgtcgccgccgccttcgccgcgggcgacggcgaggcc
accctgctcgccttcctgggcttcctgcgcaccgccgtccagtacgagaagggcctcgac
aacgccctgcccggcggcgagaacaccgtcaaggtgctcaccgcgcacaagtccaagggc
ctggagtgggacgtcgtggccgtgcccggactggtcaccggcaccttccccagcgcccag
ggccgcgacaagtggaccgcgcaggccaaggtgctgccgcacgccctgcgcggcgacgcc
gccaccctgcccgacgtggacggctgggacgcgcgcggcatgaaggcgttccacgaggcc
atgaaggagcaccagcacaccgaggaactccgcctcggctatgtcaccttcacccgcccc
cgctccctcctgctcggctccggccactggtggggccccagccagaagaagaagcgcggc
ccctccgacttcctccaggagctgtacgcgcactgcgccgccgggcacggcgagatcgag
gtctgggccgaggagcccgccgacgacgaggagaacccggccctgcgggagcccgacgcc
gacctggcctggccgctgcccctcgacgccgacgccctcgcccgccgccgcgccgccgcc
gagaccgtcctcgcccacctcgacaccctgcccgccaccggcccggcccccgccgacccg
gccacccacgaggacccggactggccgacaccgccggaggaaccgccgtacgaagagccg
tacgaggagccgccgtacgacgggccggacgaggaatcgccgtacgacgaggtcgacgac
gggccgccgtacgaggacccgagcggcgccgggccgcgccacgagccctacggcgacgat
ccgcacaccggcgcccccgtcatcccccaccaggcacccgcccccgccgagccgggcccc
cgctccgacctcacccccgaggagtcgcgcctgatcgcctcctgggaccgcgatctggac
gcgctcgccggggaactgctgctggcccgccgcgccgtcacggacgtacccctgcccgcc
acgctcaccgccacccagctgctgcggctggccgaggacccggacgggctcgcgcaggaa
ctcgcgcgccccatgccgcgccccccgcagcgggccgcgcgccggggcacccgcttccac
gcctgggtggagtcgcgctacgaggagctggcgctgcccctgctggagcccgacgagctg
cccggcgccgatgccgagatcgccgacgaagaggacctggaggccctcaaggaagccttc
gaacgcaccgagtacgcccggcgcacgccctaccgcgtcgaggagccggtccaggtcgtc
ctcgccggccgggtcgtgcgcggccggatcgacgccgtctaccgggagggcgagggcgcg
tcggcgacgtacgagatcgtggactggaagaccggccgggagcacaccgccgacccgctc
cagctcgccgtgtaccggctggcctgggccgaacagcagggcgtcccgctccacgcggtc
accgccacattcctctacgtgcgcaccggggaggccgtacgcccccgtgacctgcccggc
cgggccgcgctggaacggctgctcacggacggggccggaccgccgacggcgagggcgacg
tga
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