Streptomyces rochei: SRO_2780
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Entry
SRO_2780 CDS
T06265
Name
(GenBank) type IV secretion protein Rhs
Organism
srj
Streptomyces rochei
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T7SS_signal
RHS_repeat
DUF6531
TEN_YD-shell
RHS
TruB_C
OCRE
SYF2
TPR_11
YL1_C
Motif
Other DBs
NCBI-ProteinID:
BBC93956
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Position
3136383..3141128
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AA seq
1581 aa
AA seq
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MGLGELGKITNTVLGAGEETWDAGKKKVGEGVDWAAHKVGGELDHVGLHKWADKVEDAGD
GLASYLGATPGEKQLGETDDPDQLLHGAPERIRESAGHLRDFNGAFDKVGRGMRKVDSTG
WEGEGGDAFRKKFGVHPAKWTTAAEACLGAAQALESYADTVKWAQSQAKEAVELYKKGTK
ASKDAVEAYNKKADAYNAKVKANEDPGPKPEPFHDPGKADIDSAVHKLAAARKQRNTAAT
EAQGKIRAALAHAPAEPPPLTRLRHELKDGCTEIDAEAVHFVGGVVKGTAGLLTFVRGLN
PLDIYNVTHPANYLQHVSMTLSGLVALDEHPDRALKGMWSDFKKDPSEFGGRMLPQLFVG
DGIGLETGLTRDAAQAGLRSAAEGTLKDGARTGAEDAGKATARDTVREDPHQPSREQNSV
SSEGTDPIDLATGKMYLPQTDVALPGTLPLLLKRRVESGYRLGRWFGPSWSSTLDQRLEI
DAEGVVFVTEDGLLLSYPHPAPGLPTLPSHGPRRPLDRVAGGYTITDPETRRTWHFADRT
EHLAVLEQVDDRNGNWLTFEHDAEGTPLAVFTSAGQGVRITTDSGRVTSYRLATTGEELK
RFAYTDGNLTEVVNSSGLPLRFGYDDRGRVTSWTDTNDRSYTYAYDDRDRCVAEGGAAGH
MALRLTYADPDPVTGLRTTTATTGAGHTRRYLVNDAWQVVAENDPLGATTSYVRDRYNRL
LSTTDPLGHTTSFRYDETGNLTSIVRPDGRESRAEYNELGLPVKLVRPDGTTVRQTFDTR
GNRTSVTDSSGCTTRFTYNECGHLTSVTDPLGHTTTLVCDPAGLPVTVTDPLGAVTRYTR
DAFGRPTVITDPAGATTRLEWSVEGHLTRRTAADGTTESWTYDGEGNCTTHTDPLGGVTR
FEYSHFDLLTARTGPDGVRYEFAHDTELRLTQVTNPQGLTWSYAYDAAGHLLTETDFDDR
TLSYEYDAAGRLTSRRNALGEVVSFERNELGQVLRKNAAGQVTTYAYDLTDQLARATGPD
GTTLTLLRDRHGRLRSETVNGRTLTYTYDELGRRTGRTTPTGAVSTWSYDAAGHRTGMVA
SGRPIDFTYDEAGRELTRRIGDTLTLAHTFDPLGRLTTQTVRATSDALLQHRSYTYRADG
NLTGIDDHLSGPRRFDLDATGRVTAVHATGWTERYAYDEAGNQTHASWPTTHPGTDATGP
RTYQGTRITRAGNIRYEHDALGRITLRQKTRLSKKPDTWHYTWDTEDHLTSVTTPDGTQW
RYTYDPLGRRTAKHRLADDGETVLERVTFTWDGTTLCEQTTTSPALPNPVTLTWDHQGLR
PLSQTERITTTDTPQEEIDSRFFAIITDLVGTPTELIDEQGNLAWQTRTTLWGTTAWATN
STTYTPLRFPGQYYDPETGLHYNYFRHYDPETARYLTLDPLGLTPAPNPAIYPQNPHTRS
DSLGLAPEYPDGESRNPFDFREPNPNFPPDETTTQAMRSAPIGGNIDCSEIAEYIKRNGG
GNGKIINFTTRNSSEIVIPENMGKELVAYRYHDVYTDGRYVYDPGMSSNPIPYGDFERAI
RLSNPGKKLLVQDGGFSGPLW
NT seq
4746 nt
NT seq
+upstream
nt +downstream
nt
atgggcctgggtgagctcggcaagatcaccaacaccgtcctcggcgccggcgaggagacc
tgggacgcgggcaagaagaaggtcggcgagggggtcgactgggccgcgcacaaggtgggc
ggcgaactggaccacgtcggcctgcacaagtgggccgacaaggtcgaggacgcgggcgac
gggctcgcctcctacctgggtgccaccccgggcgagaagcagctcggcgagaccgacgac
ccggaccagctcctgcacggcgccccggagcggattcgcgaaagcgcgggacatctgcgg
gacttcaacggtgccttcgacaaggtcggccgagggatgcgcaaggtcgactccaccggc
tgggagggcgagggcggggacgccttccgcaagaaattcggcgtccacccggccaagtgg
accaccgcggccgaggcctgcctcggggcggcacaggctctggagtcgtacgcggacacc
gtcaagtgggcccagagccaggccaaggaggccgtcgagctctacaagaagggcaccaag
gcgtccaaggacgcggtcgaggcgtacaacaagaaggccgacgcctacaacgcgaaggtc
aaggcgaacgaggacccgggccccaagcccgagccgttccacgaccccggcaaggccgac
atcgactcggccgtgcacaagctcgccgccgcccgcaagcagcgcaacaccgccgccacg
gaggcccagggcaagatcagggcggccctcgcccacgcccccgccgagcccccgccactg
acccggctgcgccacgaactcaaagacggctgcacggagatcgacgccgaggccgtccac
ttcgtgggcggcgtcgtcaagggcacggcgggcctgctcaccttcgtgcgcggcctcaac
cccctcgacatctacaacgtcacgcacccggccaactacctccagcacgtcagcatgacc
ctcagcggtctggtggccctcgacgaacaccccgaccgcgcgctgaagggcatgtggtcc
gacttcaagaaggacccgtccgagttcggcggccggatgctgccccagctcttcgtcggc
gacggcatcggcctggagacgggtctgacccgcgacgcggcgcaggcgggcctgcgttcg
gcggccgagggcacgctgaaggacggggcccggacgggcgcggaggacgcggggaaggcc
accgcccgggacacggtccgcgaggacccccatcagccctcccgcgagcagaattcggtg
tcgagcgagggcaccgaccccatcgacctcgccaccggcaagatgtacctgccgcagacg
gacgtcgccttgcccggcacgctccccctgctcctcaagcggcgggtggagtccggctac
cgcctgggccgctggttcggcccgtcgtggtcctccacgctggaccagcgcctggagatc
gacgcggagggagtcgtcttcgtcacggaggacggcctgctcctctcctacccccacccc
gcgccaggtctgccgacgctccccagccacggcccccgccgaccgctggaccgcgtggcc
ggcggctacacgatcaccgatccggagacccgccgcacctggcacttcgccgaccggacc
gagcatctggccgtcctggagcaggtggacgaccgcaacggcaactggctcaccttcgag
cacgacgccgagggcaccccgctggccgtcttcacaagcgccggccagggcgtccgtatc
accacggactcgggccgcgtcacgtcgtaccgcctggcgacgacgggcgaggaactcaag
cgcttcgcctacacggacggcaacctcaccgaggtcgtcaactcctcgggcctgcccctg
cgtttcggctacgacgaccgcggccgggtgacgtcctggacggacacgaacgaccgctcc
tacacctacgcgtacgacgaccgggaccgctgcgtggcggagggcggcgccgcagggcac
atggcgctccgcctgacgtacgcggacccggacccggtcacgggcctgcgcaccacgacg
gcgacgaccggcgcgggccacacccgccgctacctggtcaacgacgcctggcaggtggtc
gcggagaacgaccccctgggcgcgaccacgagctacgtccgcgaccgctacaaccgcctg
ctctccacgacggacccgctgggccacacgacgtcgttccgctacgacgagacgggcaac
ctcacctcgatcgtccgcccggacggccgggagtcgagggcggagtacaacgagctgggt
ctgccggtgaagctggtccgcccggacggcacgaccgtccggcagaccttcgacacccgg
ggcaaccgcacttcggtgacggactcctccggctgtacgacccgcttcacctacaacgag
tgcggccatctgacctcggtgacggaccccctgggccacacgacgacgctggtgtgcgat
cccgcgggcctccctgtgacggtgaccgatcctctcggcgcggtcacccgctacacccgg
gacgccttcggccgcccgaccgtgatcacggacccggccggcgcgacgacacggctggag
tggtcggtcgagggccacctgacacgccgtaccgcagcggacggcacgacggaatcatgg
acctacgacggcgagggcaactgcacgacccacacggacccgttgggcggcgtgacccgc
ttcgagtactcccacttcgacctgctcacggcccgcacgggcccggacggggtgcgctac
gaattcgcccacgacacggaactgcgcctgacccaggtcacgaacccccagggtctgacg
tggagttacgcctacgacgccgccggccacctgctgacggagaccgacttcgacgaccgc
accctgagctacgagtacgacgcggcgggccgcctgacctcccgccgcaacgccctcggc
gaggtggtgtccttcgagcgcaacgaactcggccaggtcctccgcaagaacgccgccggc
caggtgaccacctacgcctacgacctgaccgaccaactggcccgggcgaccggccccgac
ggcaccaccctcaccctgctccgcgaccgccacggccggctgcgctccgagacggtcaac
ggccggacactgacctacacctacgacgaactgggccgccgcacgggccgcacgaccccg
accggtgccgtctccacctggtcctacgacgcggccggccaccgcaccggcatggtcgcg
tcgggccgcccgatcgacttcacctacgacgaggcgggccgcgaactgacccgccggatc
ggcgacacactcaccctggcccacaccttcgaccccctgggccgcctgaccacccaaacg
gtgagggctacgtcggacgccctgctccagcaccgctcctacacctaccgggccgacggc
aacctgaccggcatcgacgaccacctctccggcccccgccgcttcgacctcgacgcgacc
ggcagagtcaccgccgtccacgcgaccggctggaccgagcgctacgcctacgacgaagca
ggcaaccagacccacgcgagctggcccaccacccaccccggcacagacgcaaccggcccc
cgcacctaccagggcacccgcatcacccgcgccggcaacatccgctacgaacacgacgcc
ctgggccgcatcaccctccgccagaaaacccgcctgtcgaaaaagcccgacacctggcac
tacacctgggacaccgaggaccacctgacctcggtcaccacccccgacggcacccaatgg
cgctacacctacgaccccctgggccgccgcaccgccaagcaccgcctggcggacgacgga
gagacggtcctggaacgggtgaccttcacctgggacggcaccaccctctgcgaacagacc
acaacctcaccggccctgccaaacccggtcaccctcacctgggaccaccagggcctccgc
cccctgtcccaaaccgaacgcatcaccacaaccgacaccccacaagaagagatcgactcc
cgcttcttcgccatcatcaccgacctcgtcggcaccccaaccgaactgatcgacgaacaa
ggcaacctcgcctggcaaacccgaaccaccctctggggaaccaccgcgtgggcaacaaac
agcaccacctacacacccctacgcttccccggccagtactacgacccggaaacggggctg
cattacaactacttccgccactacgaccccgaaaccgcgcgatacctcacactcgatcca
ctcggtctgacacccgctcccaatcccgctatctacccccagaacccgcatacgcggtcc
gattccctcggactggcacctgaataccctgacggcgaatcccgcaaccccttcgatttc
agggaaccgaacccgaatttcccacccgacgagacgacgactcaggcaatgcgatcggcg
ccgattggcggtaacatcgactgttcagagatcgccgaatacattaagaggaacggtgga
gggaacggaaagattattaacttcacaacgcgcaactcttccgaaatcgtcatccctgag
aacatggggaaggagctcgtagcctatcgatatcatgacgtctacacagacggaaggtat
gtctacgacccgggtatgagctccaatccgattccatatggagattttgagcgtgcaatc
cgcctgtccaatcccgggaaaaagcttctggttcaggacgggggattctctggtcccctc
tggtag
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