Streptomyces rochei: SRO_2815
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Entry
SRO_2815 CDS
T06265
Name
(GenBank) AAA family ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
srj
Streptomyces rochei
Pathway
srj04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
srj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
SRO_2815
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
srj03019
]
SRO_2815
03009 Ribosome biogenesis [BR:
srj03009
]
SRO_2815
04131 Membrane trafficking [BR:
srj04131
]
SRO_2815
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
srj04147
]
SRO_2815
Messenger RNA biogenesis [BR:
srj03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
SRO_2815
Ribosome biogenesis [BR:
srj03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
SRO_2815
Membrane trafficking [BR:
srj04131
]
SNARE
SNARE associated proteins
Others
SRO_2815
Autophagy
Aggrephagy
Other aggrephagy associated proteins
SRO_2815
Exosome [BR:
srj04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
SRO_2815
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
Acetyltransf_1
Acetyltransf_7
Acetyltransf_10
AAA_5
AAA_22
AAA_28
RuvB_N
Acetyltransf_6
AAA_24
AAA_16
AAA_18
TIP49
AAA_14
bpMoxR
AAA_17
Acetyltransf_9
AAA_33
AAA_lid_3
Mg_chelatase
IPT
AAA_25
RNA_helicase
nSTAND3
IstB_IS21
SKI
AAA_19
IDM1_C
Motif
Other DBs
NCBI-ProteinID:
BBC93991
LinkDB
All DBs
Position
3178610..3179887
Genome browser
AA seq
425 aa
AA seq
DB search
MPAWHLRDYHDDDLDQAIQIWDQCRQADEDPVFPVSEVMAAAKAGQTAVVAVVGDELVGM
AVAQAQGKRGWILLMALAARWRERGIGSALLTELERRLRALGVRHISALLPVGAAGSKAL
ANSGYRSREGLTYYEKLEPLGAANADVLAALGGRMLPEGLWDAMAGMEREKQVVERRVVL
PLTEPALADRYGVVPPKSVILFGPPGTGKTSFAKAVSSRLGWPFVELFPSRLAADTSEGL
ATALRDAFADLAELDSVVLFIDEVEEIAAARSGKAVDPGHGVTNELLKLIPVFREHDSRL
LVCATNSVRSLDAAFLRPGRFDYVIPIGPPDPTARAAIWARYLRGMNDSVDLGRLVAASE
LFTPADIEFAARKGAQAAFEREVAHREGRPADTEDYMSAISDTRPTLTTRAIKEFGEDID
TYSRL
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
gtgccggcatggcatctgcgcgactatcacgacgacgatctcgatcaggccatccagatc
tgggaccagtgccggcaggccgacgaggacccggtgttcccggtctcggaggtcatggcc
gcggcgaaggccgggcagacggcggtggtcgcggtggtcggggacgagctggtggggatg
gccgtcgcccaggcccagggcaagcggggctggatcctgctgatggcgctcgccgcgcgc
tggcgcgagcgcggcatcggcagcgcgctgctcaccgagctggagcggcggctgcgggcg
ctgggggtacggcacatcagcgcgctgctgccggtgggcgcggcgggttcgaaggcgctg
gcgaacagcggctaccggagccgtgagggcctcacctactacgagaagctcgaaccgctc
ggcgcggcgaacgccgatgtcctcgccgcgctcggcgggcgcatgctgcccgaggggctg
tgggacgcgatggccgggatggagcgggagaagcaggtcgtggagcggcgggtggtgctg
ccgctgacggaaccggcgctggccgaccgctacggggtggtgccgccgaagtcggtcatc
ctgttcgggccgcccggcaccgggaagaccagcttcgccaaggcggtgtcctcccggctc
ggctggccgttcgtggagctgttcccctcgcggctcgccgccgacaccagcgaggggctg
gccacggcgctgcgggacgccttcgccgatctcgcggagctggactcggtggtgctcttc
atcgacgaggtggaggagatcgcggccgcccgctccggcaaggcggtggatcccgggcac
ggggtgaccaacgagctgctgaagctgatccccgtcttccgcgagcacgactcacggctg
ctggtgtgtgccaccaattccgtacggtccctcgacgcggcctttctgcggccggggcgg
ttcgactacgtcatccccatcgggccgcccgatccgaccgcccgcgcggcgatctgggcc
cgctatctccggggcatgaacgactcggtggacctcggccggctggtcgccgcgagtgag
ctgttcaccccggcggacatcgagttcgccgcccgcaagggagcacaggccgccttcgaa
cgcgaggtcgcccaccgggagggccgcccggcggacaccgaggactacatgagcgccatc
tccgacacccggccgaccctcaccacccgggcgatcaaggagttcggcgaggacatcgac
acgtacagcaggctgtga
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