Streptomyces rochei: SRO_3172
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Entry
SRO_3172 CDS
T06265
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
srj
Streptomyces rochei
Pathway
srj00061
Fatty acid biosynthesis
srj00071
Fatty acid degradation
srj01100
Metabolic pathways
srj01212
Fatty acid metabolism
srj02024
Quorum sensing
srj04146
Peroxisome
Module
srj_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
srj00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
SRO_3172
00071 Fatty acid degradation
SRO_3172
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
SRO_3172
09145 Cellular community - prokaryotes
02024 Quorum sensing
SRO_3172
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
srj01004
]
SRO_3172
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
srj04147
]
SRO_3172
Enzymes [BR:
srj01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
SRO_3172
Lipid biosynthesis proteins [BR:
srj01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
SRO_3172
Exosome [BR:
srj04147
]
Exosomal proteins
Exosomal proteins of breast milk
SRO_3172
Exosomal proteins of breast cancer cells
SRO_3172
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Paralog
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GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
BBC94348
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All DBs
Position
complement(3543405..3545327)
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AA seq
640 aa
AA seq
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MSPHSNSHVSAVDYDGRPLLVAPHTRRLDGAVREAVVPPFAAPVTHGSLADLPFDNAAED
PDAVVLSRKLGNGHWKDITAARFAEEVLAVAKGLIAEGLVPGDRIAIMARTTYEWTLLDF
AAWAAGLVTVPVYPTSSLFQTRWILHDSGAVALVTETGAQAAALGPELQHLPELRHLWIM
EKGHVERLADAGAPVPEGEVGVRRGMLGPATLATLVYTSGTTGRPKGCALSHGNFFAEVD
NAIELLHPVFKQHDSDPSVLLFLPLSHVFGRMVAIACVRARVRLGHAPSLKAEDLLPDLA
AFRPTALLTIPYMLEKIFNSARAQAESGGRGAVFDRAAAVARRYGEALQASQSGTGDGPG
RVLRTQRGFYDPLVYRRIRTAMGGRVRHVICGGSPLGRRLAAFYTGAGIGIYEGYGLTET
TGASTVTPPLKPRLGTVGWPLPGTRVRIAADGEILISGDHVLRGYWDPQAGGVVPITREG
WLHTGDLGELDDDGYLTITGRKKELLITSGGKSVAPAPLENWLRQHPLISQVMLVGDDRP
YVAALLTLDAEGIVHWRQMNGKHPVPPELVTDDPDLRAVLQRAVDDTNRLVSRPESIRRF
TVLPYDFTEEAGHLTPSMKLRRARILADFGREVEGLYDGL
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
gtgtccccccattccaactcccatgtctccgccgtcgattacgacggccggcccctgctg
gtcgcgccccacacgcggcgcctcgacggagccgtacgggaggccgtcgtaccgccgttc
gcggcgccggtgacccatgggtcgctggccgacctgccgttcgacaacgcggccgaggac
ccggacgcggtggtgctcagccgcaagctcggaaacggccactggaaggacatcacggcc
gcgcgcttcgccgaggaggtgctcgcggtggcgaaggggctgatcgcggaggggctggtg
cccggcgaccggatcgcgatcatggcgcgtacgacgtacgagtggacgctgctcgacttc
gccgcctgggccgcgggcctcgtgaccgtccccgtctaccccacctcctccctcttccag
acccgctggatcctgcacgactccggcgccgtcgccctggtgaccgagaccggcgcccag
gccgccgcgctcggtcccgaactgcaacacctgcccgaactgcggcacttgtggatcatg
gagaaggggcatgtcgagcggctcgcggacgcgggggcgccggtgccggagggcgaggtc
ggggtgcggcgcggcatgctcgggcccgccaccctcgccaccctcgtctacacctccggc
accaccggacgccccaagggctgtgccctctcgcacggcaacttcttcgccgaggtggac
aacgcgatcgaactgctccaccccgtcttcaaacagcacgacagcgacccgtccgtgctt
ctcttcctccccctctcccatgtgttcgggcggatggtcgccatcgcctgcgtccgcgcc
cgcgtccgcctcgggcacgcgcccagcctcaaggccgaggacctgctgccggacctcgcc
gccttccggcccaccgccctgctgaccatcccctacatgctggagaagatcttcaactcg
gcccgcgcacaggccgagtcgggcggccggggtgccgtcttcgaccgcgccgccgccgtc
gcccggcgctacggcgaggcgctccaggcgagccagtccggcaccggcgacgggcccggc
cgcgtcctgcgcacccagcgcggcttctacgaccccctcgtctaccgccgtatccgcacg
gcgatgggcggccgggtcagacacgtcatctgtggcggatccccgctcgggcgccgcctg
gccgcgttctacacgggtgcgggcatcgggatctacgaggggtacggcctcacggagact
actggcgcgagcaccgtcacgccgccgctcaaaccccggctggggaccgtgggctggccg
ctgcccggcacccgggtacggatcgccgccgacggggagatcctgatctccggcgaccat
gtgctgcgcggctactgggacccacaggccggcggtgtcgtccccatcacccgcgaaggc
tggctgcacacaggggacttgggcgagctggacgacgacggctacctcaccatcaccggc
cgcaagaaggaactcctcatcacctccggcggcaagtccgtggcccccgccccgctggag
aactggctgcgccaacaccccctgatctcccaggtgatgctggtcggagacgaccgcccg
tacgtcgcggccctgctcaccctcgacgccgagggcatcgtccactggcggcagatgaac
gggaagcaccccgtgccgcccgaactcgtcaccgacgacccggacctgcgggccgtactc
cagcgcgccgtggacgacaccaaccgtctcgtctcgcggcccgagtccatccgccgcttc
accgtcctgccgtacgacttcacggaggaggccggtcatctcacgccctccatgaagctg
cggcgcgcgcggatcctcgcggacttcggccgggaggtggaggggctgtacgacgggctg
tga
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