Streptomyces rochei: SRO_3178
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Entry
SRO_3178 CDS
T06265
Name
(GenBank) uracil-DNA glycosylase
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
srj
Streptomyces rochei
Pathway
srj03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
srj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SRO_3178
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
srj03400
]
SRO_3178
Enzymes [BR:
srj01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
SRO_3178
DNA repair and recombination proteins [BR:
srj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
SRO_3178
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
BBC94354
LinkDB
All DBs
Position
complement(3549352..3550110)
Genome browser
AA seq
252 aa
AA seq
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MGDPADDHRDPVSGAHGTHGLSVYSGACGPSGYSADMASTPTPEDAYTAVPFVPARGGLG
ALRAAAADCRGCPLHAPATQTVFGEGDQNARVMLVGEQPGDQEDRQGRPFVGPAGHLLHK
ALEEAGLDPAQAYVTNAVKHFKFAQTEPGKRRIHRAPTLREMSACAPWLVRELALVQPEL
IVILGATAGKALLGSSFRVGRVRGTVIEQDIHGRPERLLPTVHPSSVLRSDDRDAAYQGF
LADLKIAVQALG
NT seq
759 nt
NT seq
+upstream
nt +downstream
nt
gtgggtgacccggcggacgaccaccgggacccggtgagcggcgcccacggcacccacggc
ctctccgtctactcgggtgcctgcggcccctccgggtactcggcggacatggcctccacc
cccacccccgaggacgcctacaccgccgtccccttcgtccccgcccgcggcggactcggc
gccctgcgcgcggcggcggccgactgccgcggctgccccctgcacgcccccgccacccag
accgtcttcggggagggggaccagaacgcccgggtgatgctcgtgggggagcagcccggt
gatcaggaggaccggcagggcaggcccttcgtgggcccggccgggcatctgctgcacaag
gcgctggaggaggccgggctggatccggcgcaggcgtacgtcaccaacgcggtcaagcac
ttcaagttcgcgcagaccgagcccggcaagcgcaggatccaccgcgcccccaccctgcgg
gagatgtcggcctgcgcgccctggctggtgcgggaactggcgctcgtccaacccgagttg
atcgtcatcctcggcgccaccgcgggcaaggcgctgctcggctcctccttccgggtcggc
cgggtgcgcggcaccgtcatcgagcaggacatccacggccgccccgaacgactgctcccc
accgtgcatccgtcgtccgtgctccgctccgatgaccgcgacgccgcctaccagggcttt
ctcgccgatctgaaaatcgccgtacaagccctcgggtaa
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