Streptomyces rochei: SRO_3209
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Entry
SRO_3209 CDS
T06265
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
srj
Streptomyces rochei
Brite
KEGG Orthology (KO) [BR:
srj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
srj03021
]
SRO_3209
Transcription machinery [BR:
srj03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SRO_3209
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
KORA
HTH_Crp_2
HTH_23
MarR_2
HTH_37
HTH_3
HTH_Tnp_4
MarR
HTH_31
Trp_repressor
HTH_24
Motif
Other DBs
NCBI-ProteinID:
BBC94385
LinkDB
All DBs
Position
3581534..3582379
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AA seq
281 aa
AA seq
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MALMTTTAAGTRVPGLPDVADPSKVAPKDARDLSRLFFGQLATLEEGTPEYSYARNTLIE
MNMSLVRYAAGRFRSRGPEEMEDIVQVGMIGLIKAIDRFELSREAEFTSFAIPYIVGEIK
RFFRDTTWAVHVPRRLQEARVQLARATEELRGRLDREPTVKELSELMSLPEDEVREARLA
SNGYNSSSLDATLGGSQDGEAALQDFIGAEDTALELVEDFHALAPLIAGLDERDRQIIHM
RFVEELTQAQIGERLGVSQMHVSRLLSRCLARLREGMLTTG
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atggcactcatgaccacgacggcagccggcacgcgggtccccggcctgcccgatgtcgcc
gacccctccaaggtggcgcccaaggacgcccgcgacctctcccggctcttcttcgggcag
ctggcgacgctggaggagggcacacccgaatacagctacgcccgcaacacgctgatcgag
atgaacatgtccctggtccgctacgcggccggccggttccgcagccggggaccggaggag
atggaggacatcgtccaggtcggcatgatcggcctgatcaaggcgatcgaccggttcgag
ctgtcccgcgaggcggagttcacctccttcgccatcccctacatcgtcggcgagatcaag
cggttcttccgcgacaccacctgggccgtgcacgtgccccggcgcctccaggaggcccgg
gtgcagctcgcccgggcgacggaggagctgcgcggccggctggaccgcgaaccgacggtc
aaggagctgtcggagctgatgagcctgccagaggacgaggtgcgggaggcccggctggcc
tcgaacggctacaactcctcctccctggacgccacactcggcggcagccaggacggtgaa
gccgcgctgcaggacttcatcggcgccgaggacacggccctggaactggtggaggacttc
cacgcgctggcgccgctgatcgccggactggacgagcgggaccggcagatcatccacatg
cggttcgtggaggagctcacccaggcccagatcggcgaacgcctgggcgtctcccagatg
cacgtctcccggctgctctcccgctgcctggcccggctgcgcgagggcatgctcaccacg
ggctga
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