Streptomyces rochei: SRO_3797
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Entry
SRO_3797 CDS
T06265
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
srj
Streptomyces rochei
Brite
KEGG Orthology (KO) [BR:
srj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
srj03021
]
SRO_3797
Transcription machinery [BR:
srj03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SRO_3797
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_23
HTH_Crp_2
Sigma70_ECF
HTH_3
MarR
HTH_24
HTH_31
DUF7343
Motif
Other DBs
NCBI-ProteinID:
BBC94973
LinkDB
All DBs
Position
complement(4231749..4232663)
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AA seq
304 aa
AA seq
DB search
MSAEQGSSKVLTPAKSEAAPKELDALDVLDGIEVVTTLDAVPAPATPPTGEAIDTRTLSR
SLFLRLAALDENSPERAYVRDTLIELNLPLVRYAAARFRSRNEPMEDIVQVGTIGLIKAI
DRFDCERGVEFPTFAMPTVVGEIKRFFRDTSWSVRVPRRLQELRLALTKASDELSQKLDR
SPTVTELAAVLGVSEEDVVDGLAVGNAYTASSLDSPAPEDDGGEGSLADRLGYEDTALEG
VEYRESLKPLLAKLPPRERRIIMLRFFANMTQSQIGEEVGISQMHVSRLLTRTLSQLREG
LISD
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcagaacagggcagctcgaaagtgctgacgcccgcgaagagcgaggcggcgccc
aaggagctcgacgcactcgacgtcctcgacggcatcgaggtcgtcacgaccctcgacgcc
gtgcctgccccggccaccccgccgacgggcgaggccatcgacacccgcaccctgtcccgc
tccctgttcctgcgcctggccgcgctggacgagaacagccccgagcgcgcctacgtccgg
gacaccctgatcgagctgaacctgccgctggtccgctacgcggcggcacgtttccgctcg
cgcaacgagccgatggaggacatcgtccaggtcggcaccatcggcctgatcaaggcgatc
gaccgcttcgactgcgaacggggcgtggagttcccgacgttcgcgatgccgacggtggtc
ggcgagatcaagcgcttcttccgcgacacctcctggtcggtgcgggtgccgcgccgcctc
caggagctgcgcctggccctcaccaaggccagcgacgagctgtcgcagaagctggaccgc
tcccccacggtgaccgaactggccgccgtcctcggtgtctccgaggaggacgtggtcgac
ggcctcgcggtcggcaacgcgtacaccgcctcctcgctggactccccggccccggaggac
gacggcggcgagggctccctggccgaccggctgggctacgaggacaccgccctggagggg
gtggagtaccgcgagtccctcaagccgctgctggccaaactcccgccccgggagcggcgg
atcatcatgctgcgcttcttcgccaacatgacgcagtcgcagatcggcgaggaggtcggc
atctcccagatgcatgtctcccggctgctcacccggaccctgtcccagctgcgcgagggc
ctgatctcggactga
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