Streptomyces rochei: SRO_3798
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Entry
SRO_3798 CDS
T06265
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
srj
Streptomyces rochei
Brite
KEGG Orthology (KO) [BR:
srj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
srj03021
]
SRO_3798
Transcription machinery [BR:
srj03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SRO_3798
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
HTH_23
GerE
HTH_Crp_2
MarR_2
NirdL-like_HTH
HTH_3
MarR
DUF134
DUF4423
HTH_5
DUF7343
HTH_Tnp_4
Motif
Other DBs
NCBI-ProteinID:
BBC94974
LinkDB
All DBs
Position
complement(4233067..4233903)
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AA seq
278 aa
AA seq
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MTVPASTAPPQEEAPVPASLPPGKRRGADTRALTQVLFAELKELAPGTPEHNRVRGALIE
ANLPLVRYAAARFRSRNEPMEDVIQVGTIGLINAIDRFDPDRGVQFPTFAMPTVVGEIKR
YFRDNVRTVHVPRRLHELWVQVNSATEDLTTLHGRSPSTAEIAERLRISEEEVLSCIEAG
RSYHATSLEAAQEGDGLPGLLDRIGYEDPALDGVEHRDLVRHLLVQLPEREQRILLLRYY
SNLTQSQISAELGVSQMHVSRLLARSFQRLRSANRIDA
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
ttgaccgtgccggccagtactgcgccgccccaggaggaggcccccgtccccgcctctcta
cccccagggaaacgccgcggcgcggacacccgggccctgacccaggtgctcttcgccgag
ctgaaggagctcgcgcccggcactccggagcacaaccgcgtgcggggcgcgctgatcgag
gcgaacctcccgctcgtgcgctacgccgccgcccgcttccgctcccgcaacgagcccatg
gaggacgtgatccaggtcggcaccatcggtctgatcaacgccatcgaccgcttcgacccg
gaccggggcgtgcagttcccgaccttcgccatgccgaccgtcgtgggcgagatcaagcgg
tacttccgggacaacgtccgcaccgtgcacgtaccgcgccggctgcacgagctgtgggtg
caggtcaacagcgccaccgaggacctgaccacgctgcacggccgctccccctccaccgcc
gagatcgccgagcggctgcggatcagcgaggaggaggtgctcagctgcatcgaggcgggc
cgctcgtaccacgccacctccctggaggccgcgcaggagggcgacgggctgcccgggctg
ctggaccgcatcggctacgaggacccggccctggacggcgtggagcaccgcgacctggtc
cgccacctcctggtccaactccccgagcgcgaacagcggatcctgctgctgcgctactac
agcaacctcacccagtcgcagatcagcgcggaactcggcgtctcccagatgcatgtctcg
cgtctgctcgcccgcagcttccagcggctgcgctcggcgaaccgcatcgacgcgtag
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