Streptomyces rochei: SRO_3890
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Entry
SRO_3890 CDS
T06265
Name
(GenBank) ATP-dependent helicase
Organism
srj
Streptomyces rochei
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
RDM3_C
Helicase_C
Flavi_DEAD
ResIII
FeoB_Cyto
Motif
Other DBs
NCBI-ProteinID:
BBC95066
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Position
4327714..4329870
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AA seq
718 aa
AA seq
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MSVSSFDQIVVPENENVNELVDEATEATETQATEAPQTPQITFADLGLPEGVVRKLAQNG
VTSPFPIQAATIPDALLGKDILGRGRTGSGKTLSFGLPTLARLAGGRTEKKRPRAVILTP
TRELAMQVADALQPYGDVVGLKMKVVCGGTSMGNQIYALERGVDILVATPGRLRDIINRG
ACSLEDVQITVLDEADQMSDLGFLPEVTELLDQVPADGQRMLFSATMENEIQTLVDRYLK
NPVSHEVDAAQGAVTTMSHHILIVKPKDKAPVTAAIASRKGRTIIFVRTQLGADRVAEQL
RDAGVKADALHGGMTQGARTRTLADFKDGYVNVLVATDVAARGIHVDGIDLVLNVDPAGD
HKDYLHRAGRTARAGRTGTVVSLSLPHQRRQIFRLMEDAGVDAGRHIIQGGAAFEPEVAE
ITGARSMTEVQAESAGNAAQQAEREVGQLTKQLERAQRRATELREEADRLVARVARERGE
DPETAVAEAQASAAEELAAEAPAARETEREERPAASAAPERRDDRRPFDRDRRDDRGGRG
FERRDDRGGRSFERRDDRGGFRRDDRGDRRDDRGGRSFERRDDRRPFDRDRRDDRGGRSF
ERRDDRRDDRGGRSFERRDDRGGFRRDDRGERRDDRGGRSFERRDDRGGDRGGFRRDDRG
GHRGSDRPFNRDRRDDRPGFRSGGHERPYGRRDDHRGTGGTGSSFGRRDDKPRWKRNG
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtgtccagttttgaccagatcgtcgtgcccgaaaacgagaacgtgaacgaactc
gtggacgaggcgaccgaggccactgagacccaggccactgaggccccccagaccccccag
atcacctttgccgacctcggcctccccgagggcgtcgtgcgcaagctcgcgcagaacggc
gtgacgtcccccttcccgatccaggccgcgaccatcccggacgccctgctcggcaaggac
atcctcggccgtggccgcaccggctccggcaagaccctctccttcggtctgccgacgctg
gcccggctggccggcggccgcaccgagaagaagcgcccccgcgcggtcatcctcaccccg
acccgtgagctggccatgcaggtcgcggacgccctccagccgtacggcgacgtcgtcggc
ctgaagatgaaggtcgtctgcggcggcacgtccatgggcaaccagatctacgccctggag
cgcggcgtcgacatcctcgtcgccaccccgggccggctgcgcgacatcatcaaccgcggc
gcctgctcgctggaggacgtccagatcaccgtcctggacgaggccgaccagatgtccgac
ctgggcttcctgcccgaggtcaccgagctgctggaccaggtcccggccgacggtcagcgc
atgctcttctccgccaccatggagaacgagatccagaccctcgtcgaccgctacctgaag
aaccccgtctcccacgaggtggacgcggcccagggcgcggtgacgaccatgtcgcaccac
atcctcatcgtgaagcccaaggacaaggcgccggtcaccgccgcgatcgcctcccgcaag
ggccgcacgatcatcttcgtccgcacccagctgggcgccgaccgcgtcgccgagcagctg
cgcgacgcgggtgtgaaggccgacgcgctgcacggcggcatgacccagggcgcgcgtacc
cgcaccctggcggacttcaaggacggttacgtcaacgtcctggtcgccaccgacgtcgcc
gcccgcggcatccacgtggacggcatcgacctggtcctcaacgtggacccggccggcgac
cacaaggactacctgcaccgtgcgggccgtaccgcgcgtgcgggccgtaccggcaccgtc
gtctccctgtcgctgccgcaccagcgccgccagatcttccgtctgatggaggacgccggc
gtcgacgcgggccgccacatcatccagggcggcgccgccttcgagccggaggtcgccgag
atcaccggcgcccggtccatgaccgaggtgcaggccgagtccgcgggcaacgccgcgcag
caggccgagcgcgaggtcggccagctgaccaagcagctggagcgtgcccagcgccgcgcc
actgagctgcgcgaggaggccgaccgcctggtggcccgggtcgcccgcgagcgcggtgag
gacccggagaccgcggtggccgaggcgcaggcctccgccgccgaggagctggcggccgag
gcgcccgccgcccgggagaccgagcgcgaggagcgtccggcggcttcggcggcgcccgag
cgccgcgacgaccgtcgtccgttcgaccgtgaccgccgcgacgaccgcggtggccgtggc
ttcgagcgccgtgacgaccgtggtggccgttccttcgagcgccgtgacgaccgtggcggc
ttccgccgtgacgaccgcggtgaccgtcgtgacgaccgtggtggccgctccttcgagcgc
cgcgacgaccgtcgtccgttcgaccgtgaccgccgtgacgaccgtggcggtcgctccttc
gagcgccgtgacgaccgccgcgacgaccgtggtggccgttccttcgaacgccgtgacgac
cgtggcggcttccgccgtgacgaccgcggcgagcgccgtgacgaccgtggtggccgttcc
ttcgagcgtcgtgacgaccgcggtggcgaccgtggcggcttccgccgtgacgaccgcggt
ggccaccggggcagcgaccgtccgttcaaccgcgaccgccgcgacgaccgtccgggcttc
cgctccggcggccacgagcgcccctacggccgtcgtgacgaccaccgcggcaccggcggc
accggctcctccttcggccgccgcgacgacaagccgcgctggaagcgcaacggctga
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