Streptomyces rochei: SRO_4073
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Entry
SRO_4073 CDS
T06265
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
srj
Streptomyces rochei
Pathway
srj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
srj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SRO_4073
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
srj03019
]
SRO_4073
03110 Chaperones and folding catalysts [BR:
srj03110
]
SRO_4073
03029 Mitochondrial biogenesis [BR:
srj03029
]
SRO_4073
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
srj04147
]
SRO_4073
Enzymes [BR:
srj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
SRO_4073
Messenger RNA biogenesis [BR:
srj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
SRO_4073
Chaperones and folding catalysts [BR:
srj03110
]
Heat shock proteins
HSP60 / Chaperonin
SRO_4073
Mitochondrial biogenesis [BR:
srj03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
SRO_4073
Exosome [BR:
srj04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
SRO_4073
Exosomal proteins of other body fluids (saliva and urine)
SRO_4073
Exosomal proteins of breast cancer cells
SRO_4073
Exosomal proteins of colorectal cancer cells
SRO_4073
Exosomal proteins of bladder cancer cells
SRO_4073
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
DUF4844
CbiA
DUF5021
Motif
Other DBs
NCBI-ProteinID:
BBC95249
LinkDB
All DBs
Position
4507661..4509283
Genome browser
AA seq
540 aa
AA seq
DB search
MAKIIAFDEEARRGLERGMNQLADAVKVTLGPKGRNVVLEKKWGAPTITNDGVSIAKEIE
LEDPYEKIGAELVKEVAKKTDDVAGDGTTTATVLAQALVKEGLRNVAAGANPMALKRGIE
KAVEAVSAALLEQAKDVETKEQIASTASISAADTQIGELIAEAMDKVGKEGVITVEESNT
FGLELELTEGMRFDKGYISAYFATDMERMEASLEDPYILIANSKIGSVKDLLPLLEKVMQ
SGKPLLIIAEDVEGEALSTLVVNKIRGTFKSVAVKAPGFGDRRKAMLGDIAILTGGEVIS
EEVGLKLENATLDLLGRARKVVITKDETTIVDGAGSSEQVNGRVNQIRAEIENSDSDYDR
EKLQERLAKLAGGVAVIKAGAATEVELKERKHRIEDAVRNAKAAVEEGIVAGGGVALLQA
SQVFEKLELEGDEATGANAVRIALEAPLKQIAVNAGLEGGVVVEKVRNLTPGHGLNAATG
EYVDLVAEGIIDPAKVTRSALQNAASIAALFLTTEAVIADKPEKAAAAAPGGMPGGDMDF
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atggccaagatcatcgcgttcgacgaggaggcgcggcgcggcctcgagcgcggcatgaac
cagctcgcggacgccgtcaaggtgacgctcggccccaagggtcgcaacgtcgtcctcgag
aagaagtggggcgcccccacgatcaccaacgatggtgtctccatcgccaaggagatcgag
ctcgaggacccgtacgagaagatcggcgccgagctggtcaaggaagtcgccaagaagacg
gacgacgtcgccggtgacggtacgaccaccgcgaccgtcctcgcccaggccctggtcaag
gaaggcctgcgcaacgtcgccgccggtgccaacccgatggccctgaagcgcggtatcgag
aaggccgtcgaggccgtctccgccgccctgctggagcaggcgaaggacgtcgagaccaag
gagcagatcgcctccaccgcgtccatctccgccgccgacacccagatcggcgagctgatc
gccgaggcgatggacaaggtcggcaaggaaggcgtcatcaccgtcgaggagagcaacacc
ttcggtctggagcttgagctcaccgagggcatgcgcttcgacaagggctacatctccgcc
tacttcgccaccgacatggagcgcatggaggcgtcgctggaggacccgtacatcctcatc
gcgaactccaagatcggctccgtcaaggacctgctcccgctcctggagaaggtcatgcag
tcgggcaagccgctgctgatcatcgccgaggacgtcgagggcgaggccctgtcgaccctg
gtcgtcaacaagatccgcggcaccttcaagtccgtcgccgtcaaggccccgggcttcggc
gaccgccgcaaggccatgctcggcgacatcgccatcctcacgggcggcgaggtcatctcc
gaggaggtcggcctcaagctggagaacgcgaccctggacctcctgggccgcgcccgcaag
gtcgtcatcaccaaggacgagaccaccatcgtcgacggtgccggctcctcggagcaggtc
aacggccgggtgaaccagatccgcgccgagatcgagaacagcgactcggactacgaccgc
gagaagctccaggagcgcctggccaagctcgcgggcggcgtcgcggtcatcaaggccggt
gccgccaccgaggtggagctcaaggagcgcaagcaccgcatcgaggacgccgtgcgcaac
gccaaggcggccgtcgaggagggcatcgtcgccggtggtggcgtggccctgctccaggcc
tcccaggtcttcgagaagctggagctcgagggtgacgaggcgaccggcgccaacgccgtg
cgcatcgccctggaggccccgctgaagcagatcgccgtcaacgccggcctcgagggcggt
gtcgtggtggagaaggtgcgcaacctgaccccgggccacggcctgaacgccgcgaccggt
gagtacgtcgacctggtcgccgagggcatcatcgacccggcgaaggtgacccgttccgcg
ctccagaacgccgcctccatcgccgcgctgttcctcaccaccgaggccgtcatcgccgac
aagccggagaaggccgccgcggccgctccgggcggcatgccgggcggtgacatggacttc
tga
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