Streptomyces rochei: SRO_4615
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Entry
SRO_4615 CDS
T06265
Name
(GenBank) very short patch repair endonuclease
KO
K07458
DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
Organism
srj
Streptomyces rochei
Brite
KEGG Orthology (KO) [BR:
srj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
srj03400
]
SRO_4615
DNA repair and recombination proteins [BR:
srj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
SRO_4615
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vsr
DUF559
MTES_1575
Motif
Other DBs
NCBI-ProteinID:
BBC95791
LinkDB
All DBs
Position
complement(5093915..5094319)
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AA seq
134 aa
AA seq
DB search
MQAIRNRDTKPEWLIRRLVHAQGLRYRVAAKPLPGLRRTADMVFRPAKVAVFIDGCYWHG
CPEHYVPPRTNPGYWSDKVARNMARDRDTDQRLEEAGWTVLRFWEHEPSEVCAARIAAEV
EKRRTTPRRGKERN
NT seq
405 nt
NT seq
+upstream
nt +downstream
nt
atgcaggccatccggaaccgggacaccaagccggaatggctcatccggaggctcgtacat
gcccaggggctccggtacagagttgcggccaagccgctgcccggcctccggcggaccgct
gacatggtcttccgcccggcgaaagtggccgtcttcatcgacggttgctactggcacggc
tgtccggagcattacgttccaccaaggactaaccccggctactggtccgacaaggtggct
cgcaacatggcgcgcgaccgggacaccgaccagcgcctggaggaggcaggctggacggtg
ctccggttctgggaacacgaaccatcagaggtttgcgctgcccggatcgcggctgaggtc
gaaaagcgacgcactacaccgcgccgggggaaagaacgcaactga
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