Streptomyces rochei: SRO_5242
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Entry
SRO_5242 CDS
T06265
Name
(GenBank) DUF3372 domain-containing protein
Organism
srj
Streptomyces rochei
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Alpha-amylase
PUD
Pullul_strch_C
Pullulanase_N2
CBM_48
Alpha-amylase_C
DUF5696
Motif
Other DBs
NCBI-ProteinID:
BBC96418
LinkDB
All DBs
Position
5755465..5760876
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AA seq
1803 aa
AA seq
DB search
MIPRWPTPARRRTTHRRRGAALAVAALTAALVQPLAAPAAQAATPPPPPSDSALAAQPAR
HGDTHEQFYFVMPDRFANGDKANDKGGLTGSRMTTGYDPTDEGFFQGGDLKGVTQKLDYI
KGLGTTALWLAPIFKNIPVQGTGANASAGYHGYWITDFTQVDPHFGTNQDLKNLISKAHA
KGMKVFFDVITNHTADVVTNKENSSDYRSKGAYPYLTKDGRPFDDADYADGTKEFPAVSD
ASFPYTPQVTAASKVPAWLNDPTMYHNRGDSTFAGESGTYGDFDGLDDLWTERPEVVHGM
EQIYERWVKDFAVDGFRIDTAKNVDLDFWTQWATALDRYAAAHGRKNFFMFGETYDTDTS
VTAPYVTQGRLDATLDFPFQGAARGYASQGASAGKLASVLGDDYKYTTDRANAYEQVTFL
GNHDMGRIGYFLEQDNPKASDAELLKKDELANEVMFLSRGNPVVYYGDEQGFTGNGGDKE
ARQTMFASQVPGYLADDEIGTDRTHASDSYDTKAPLYRQIAGLSALRKANPALTDGVQSE
RYAADGAGIYAFTRTDARSGQEYIVAFNNASEAESATFVTGSADMSYRGVYGATGSVGSD
GGRKVTVTVPAESAVVYKASGTLDKPATKPTLTLKAPAAGATGTVTLGADVDGGQLNRVV
FAAQVGNAKWQVLGSADHAPYQVTQTLGTKVPAGTALRYKAVVIDSAGHTASATAQSTTG
AVPAPAPPTASSRDYVIVHYQRTDGDYDNWGLYAWGDIADGQSTTWPAGHPFTGRDAWGA
FAYVKVKPGASNVGFLVVDKNGNKDTDSDRSIDVTRTGEVWVKQGDAGVQTQRPSSYPAP
DTAKAVIHYHRADGDYDGWGLHVWTGAANPTDWSAPLKPVKTDAYGAVFEVPLAAGASSL
SYIIHNGDEKDLAADQSLDLTSDGYEVWLLNGQDKHLLPQPAGSAADLDLTTSKAVWIDR
DTVAWDGADGAASTQLVYSHDGSITAKDGALTSDDERWLRLEKTTLTDAQKAKFPYLKDY
TAWSVDPRDRGRVRAALTGQLVASQRAADGAVLAATGVQTAGVLDALYPAATKAQLGPVF
HGGRPTLSVWAPTAQSVALEIDGADRPMHRDDATGVWSVTGPASWKGKSYRYVVKVWAPS
VRQLVTNKVTDPYSVALTANSERSVVADLDDRSLAPSGWSTLRKPKAVPLRDAQIQELHV
RDFSVGDKTVPAQDQGTYLAFTDKNSDGSKHLRELAKSGTSYVHLLPAFDFATVPEKKAD
QQSPDCDLAAYPADSDQQQACVAKSAAKDAYNWGYDPYHFTVPEGSYATDPDGTARTEQF
RQMVQGINQDGLRVVMDVVYNHTSASGQADTSVLDKIVPGYYQRLLADGSVANSTCCSNT
APENAMMGKLVVDSIVTWAKEYKVDGFRFDLMGHHPKANILAVRKALDALTLKKDGVDGK
KIILYGEGWNFGEVADNARFVQATQANMAGTGIATFSDRARDAVRGGSPFDSDPGVQGFA
SGLYTDPNGSAANGTSAEQKARLLHYQDLIKVGLTGNLAKYRFTDTDGKEVTGAEVDYNG
APAGYAAAPGDALAYVDAHDNESLFDALAYKLPQGTSAADRARMQVLAMATATLSQGPSL
SQAGTDLLRSKSLDRNSFDSGDWFNAIHWNCADGNGFGRGLPMAADNQDKWSYAGPLLTS
VKVGCPQIEGSSAAYQDLLRIRTTEKAFSLDTAGRVQSELSFPLSGKDETPGVITMTLGD
LVVVFNATPQAQRQMVSALAGTGYRLHPVQASGADPVVKTSGYTAATGTFTVPARTVAVF
TRS
NT seq
5412 nt
NT seq
+upstream
nt +downstream
nt
gtgataccgagatggccgacgcccgcacggcgtcgcaccacccaccgcaggagaggcgcg
gccctcgccgtcgccgcgctcacggccgcactcgtgcagccactggccgcgcccgccgcg
caggccgccaccccgcctccgcccccgtcggactcggccctcgcggcccagccggcccgg
cacggcgacacccatgagcagttctacttcgtcatgccggaccggttcgccaacggcgac
aaggccaacgacaagggcgggctcaccggttcgcgcatgacgaccggctacgaccccacc
gacgagggcttcttccagggcggcgacctcaagggcgtcacacagaagctggactacatc
aaggggctcggcaccaccgccctgtggctggcgccgatcttcaagaacatcccggtgcag
gggaccggtgccaacgcctcggcgggctaccacggttactggatcaccgacttcacccag
gtcgacccgcacttcggcaccaaccaggacctgaagaacctcatctccaaggcacacgcc
aagggcatgaaggtcttcttcgacgtcatcaccaaccacaccgccgacgtggtgacgaac
aaggagaactcctccgactaccgctccaagggcgcctacccgtacctcaccaaggacggc
aggcccttcgacgacgccgactacgcggacggaaccaaggagttcccggccgtctcggac
gcctccttcccgtacaccccgcaggtcaccgccgcgtccaaggtcccggcctggctcaac
gatccgacgatgtaccacaaccggggcgactccaccttcgccggtgagtccggcacctac
ggcgacttcgacggcttggacgacctgtggaccgaacgtcccgaggtcgtgcacggcatg
gagcagatctacgagcggtgggtgaaggacttcgccgtcgacgggttccgcatcgacacc
gccaagaacgtcgacctggacttctggacccagtgggccaccgcactcgaccgctacgcg
gcggcgcacggccggaagaacttcttcatgttcggcgagacgtacgacacggacacctcg
gtgaccgccccgtacgtcacccagggccgcctcgacgccaccctcgacttccccttccag
ggagcggcccgcggctacgcctcccagggcgcgagcgccggcaagctggcgagcgtcctc
ggcgacgactacaagtacacgaccgaccgggccaacgcctatgagcaggtcaccttcctc
ggcaaccacgacatgggccgcatcgggtacttcctcgagcaggacaacccgaaggcctcg
gacgccgagctgctgaagaaggacgagctggcgaacgaggtgatgttcctcagccgcggc
aacccggtcgtctactacggcgacgaacagggcttcaccggcaacggcggcgacaaggaa
gcccgccagaccatgttcgcctcccaggtgcccggctacctcgccgacgacgagatcggc
accgaccgcacccacgccagcgactcctacgacacgaaggcgccgctgtaccggcagatc
gccggcctctccgccctgcgcaaggccaacccggccctgaccgacggcgtgcagagcgag
cggtacgcggccgacggcgccgggatctacgccttcacccgcaccgacgccaggagcggc
caggagtacatcgtcgcgttcaacaacgcgagcgaggccgagtcggccaccttcgtgacc
ggttcggcggacatgtcgtaccggggcgtctacggcgcgacgggcagcgtcggttcggac
ggcggccgcaaggtcaccgtcactgtccccgccgagtccgccgtcgtctacaaggcgtcc
ggcacgctcgacaagccggccaccaagccgacgctcaccctgaaggccccggccgccggc
gccaccggcaccgtgaccctcggcgccgacgtcgacggcgggcagctgaaccgggtggtc
ttcgccgcccaggtcggcaacgccaagtggcaggtactcggctccgccgaccacgccccc
taccaggtcacccagaccctcggcaccaaggtcccggccggtaccgcgctgcgctacaag
gccgtcgtgatcgacagcgcggggcacaccgcgagcgccacggcgcagagcaccaccggc
gccgtacccgcgcccgccccgcccaccgcctcctcgcgcgactacgtgatcgtccactac
cagcgcaccgacggcgactacgacaactggggcctgtacgcctggggcgacatcgccgac
ggccagtccaccacctggccggccggacaccccttcaccggccgggacgcctggggcgcc
ttcgcctacgtcaaggtcaagccgggcgcctcgaacgtgggcttcctcgtcgtggacaag
aacgggaacaaggacaccgactccgaccggagcatcgacgtcaccaggaccggtgaggtc
tgggtgaagcagggcgacgccggcgtccagacccagcggccttcgtcgtaccccgcgccg
gacaccgccaaggccgtcatccactaccaccgcgccgacggcgactacgacggctggggg
ctgcacgtctggacgggcgccgcgaaccccaccgactggtcggcccccctgaagccggtg
aagactgatgcctatggcgccgtcttcgaggtcccgctcgccgcgggtgccagcagcctc
agctacatcatccacaacggcgacgagaaggacctcgccgccgaccagtccctcgacctc
acgtccgacggctacgaggtgtggctgttgaacggccaggacaagcatctgctgccgcag
cccgcgggcagcgccgccgacctcgacctgaccacctccaaggcggtctggatcgaccgg
gacaccgtcgcctgggacggcgccgacggtgccgcctccacccagctggtctactcccac
gacggctccatcaccgccaaggacggggccctgaccagcgacgacgagcgctggctccgg
ctggagaagaccaccctcacggacgcccagaaggccaagttcccctatctgaaggactac
acggcctggtccgtggacccgcgtgaccgcggccgggtgcgcgcggcgctcaccggccag
ctggtcgcctcccagcgcgccgccgacggtgccgtgctggccgcgaccggtgtgcagacc
gcgggcgtcctggacgccctctacccggccgccaccaaggcacagctcggcccggtcttc
cacggcggccggcccaccctctccgtgtgggcgcccaccgcccagagcgtcgccctggag
atcgacggcgcggaccggcccatgcaccgcgacgacgccaccggcgtctggtcggtcacc
gggcccgcgtcctggaagggcaagagctaccggtacgtggtcaaggtgtgggcgcccagc
gtccggcagctggtcaccaacaaggtcaccgacccctactcggtcgccctcaccgcgaac
tccgagcgcagcgtcgtggccgatctggacgacaggtccctcgccccgagcggctggtcc
accctgcgcaagcccaaggccgtaccgctgcgggacgcgcagatccaggaactgcacgtc
cgggacttctcggtcggggacaagaccgtcccggcgcaggaccagggcacctacctcgcc
ttcaccgacaagaacagcgacggctccaagcacctgagggagctggcgaagtccgggacg
tcgtacgtgcatctgctgcccgccttcgacttcgccaccgtgcccgagaagaaggccgac
cagcagagccccgactgcgatctcgccgcctacccggccgactccgaccagcagcaggcc
tgcgtggcgaagagcgccgcgaaggacgcctacaactggggctacgacccgtaccacttc
accgtccccgagggctcctacgccaccgacccggacggcaccgcgcgcaccgagcagttc
cggcagatggtgcaggggatcaaccaggacggcctgcgggtcgtgatggacgtcgtctac
aaccacacctcggccagcggccaggcggacacctccgtcctggacaagatcgtgcccggc
tactaccagcggctgctcgccgacggctcggtggcgaactccacctgctgctccaacacc
gctccggagaacgcgatgatgggcaagctggtcgtggactcgatcgtcacctgggccaag
gagtacaaggtcgacgggttccgcttcgacctcatgggccaccacccgaaggccaacatc
ctcgcggtccgcaaggccctcgacgcgctcaccctgaagaaggacggcgtcgacggaaag
aagatcatcctgtacggcgagggctggaacttcggggaggtcgccgacaacgcccgcttc
gtgcaggccacccaggcgaacatggccggtaccggcatcgccaccttctccgaccgggcc
cgcgacgcggtgcgcggcggcagccccttcgactccgaccccggcgtccagggcttcgcc
tccggtctgtacaccgaccccaacggctcggcggccaacggtacgtcggccgagcagaag
gcccggctgctgcactaccaggacctgatcaaggtcgggctgaccggcaacctcgccaag
taccgcttcaccgacaccgacggcaaggaggtcaccggcgccgaggtcgactacaacggc
gcgcccgccggatacgcggccgcgcccggcgacgccctcgcctacgtcgacgcgcacgac
aacgagtccctgttcgacgcgctcgcctacaagctgccccagggcacctcggccgccgac
cgggcccggatgcaggtcctggcgatggccacggccaccctctcgcagggcccgtccctg
tcgcaggccggcaccgatctgctgcgctcgaagtcgcttgaccgcaactccttcgacagc
ggcgactggttcaacgccatccactggaactgcgccgacggcaacggcttcggccggggc
ctgcccatggcggccgacaaccaggacaagtggtcgtacgccggaccgctgctgacctcg
gtcaaggtcggctgcccgcagatcgagggcagttcggccgcctaccaggacctgctgagg
atccgtacgaccgagaaggcgttctcgctcgacacggcgggccgggtgcagagcgagctg
tccttcccgctgtccggcaaggacgagaccccgggcgtgatcaccatgaccctgggtgac
ctggtcgtcgtcttcaacgccaccccgcaggcgcagcggcagatggtctccgccctggcc
ggaaccggataccggctgcacccggtgcaggcgtccggcgcggacccggtggtgaagacc
tccggctacacggcggccaccggcaccttcacggtgccggccaggaccgtggcggtgttc
acccgctcctag
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integrated database retrieval system
