Streptomyces rochei: SRO_5329
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Entry
SRO_5329 CDS
T06265
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
srj
Streptomyces rochei
Pathway
srj00061
Fatty acid biosynthesis
srj00071
Fatty acid degradation
srj01100
Metabolic pathways
srj01212
Fatty acid metabolism
srj02024
Quorum sensing
srj04146
Peroxisome
Module
srj_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
srj00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
SRO_5329
00071 Fatty acid degradation
SRO_5329
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
SRO_5329
09145 Cellular community - prokaryotes
02024 Quorum sensing
SRO_5329
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
srj01004
]
SRO_5329
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
srj04147
]
SRO_5329
Enzymes [BR:
srj01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
SRO_5329
Lipid biosynthesis proteins [BR:
srj01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
SRO_5329
Exosome [BR:
srj04147
]
Exosomal proteins
Exosomal proteins of breast milk
SRO_5329
Exosomal proteins of breast cancer cells
SRO_5329
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
VP17_central_barrel
Motif
Other DBs
NCBI-ProteinID:
BBC96505
LinkDB
All DBs
Position
complement(5848865..5850661)
Genome browser
AA seq
598 aa
AA seq
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MREFSLPALYEVPADGNLTDIVRRNAAQHPDVAVIARKSGGTWQDVTARQFLAEVHTAAK
GLIAAGVQPGDRVGLMSRTRYEWTLLDFAIWSAGAVTVPVYETSSPEQVQWILSDSGATA
CVVELDAHAAAVEAVRDTLPALKNVWQIEAGAIEELERLGQDVSEETVDERSSLARADDP
ATIVYTSGTTGRPKGCVLTHRSFFAECGNIVERLRPLFRTGECSVLLFLPLAHVFGRLVQ
IAPMMAPIKLGCVPDIKHLTDELAAFRPTLILGVPRVFEKVYNSARAKAQADGKGGVFDK
AADTAIAYSKAQDTASGPSLGLKIKHKVFDKLVYGKLRAVLGGRGEYAISGGAPLGERLG
HFFRGIGFTVLEGYGLTESCAATAFNPWDRQKIGTVGQPLPGSVVRIADDGEVLLHGEHL
FKEYWNNPGATAEALADGWFHTGDIGTLDEDGYLRITGRKKEIIVTAGGKNVAPAVIEDR
IRAHALVAECMVVGDGRPFVGALITLDEEFLTRWAAEHGKPAGSTASSLRDDPDLNAAIQ
EAVNDGNAAVSKAESVRKFRILASQFTEDSGHLTPSLKLKRNVVAKDYADDIEAIYAK
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
ttgcgcgagttcagccttccggccttgtacgaggtccctgcggacggaaacctgaccgac
atcgtccgcagaaacgccgcgcagcatcccgacgtcgccgtgatcgcccgcaagtccggc
ggcacctggcaggacgtgacggcccggcagttcctcgccgaggtgcacaccgcggccaag
ggactcatcgccgccggggtgcagccgggcgaccgggtgggcctgatgtcccggacgcgc
tacgagtggacgctcctcgacttcgccatctggagcgcgggcgcggtgaccgtgccggtg
tacgagaccagctcgcccgagcaggtgcagtggatcctctccgactcgggcgcgaccgcc
tgcgtcgtggagctggacgcgcacgcggccgccgtggaggccgtacgcgacacgctgccc
gcgctgaagaacgtctggcagatcgaggccggtgccatcgaggagctggagcggctcggc
caggacgtgtcggaggagacggtggacgagcgctcctcgctcgcccgcgccgacgatccg
gccaccatcgtctacaccagcggcaccaccggccgccccaagggctgcgtgctcacccac
cgcagcttcttcgcggagtgcggcaacatcgtggagcggctgcgtccgctgttccgcacc
ggcgagtgctcggtgctgctcttcctgccgctggcccatgtcttcggccggctggtgcag
atcgcgccgatgatggcgcccatcaagctgggctgcgtcccggacatcaagcacctcacc
gatgaactggccgcgttccggccgacattgatcctcggtgtgccgcgcgtcttcgagaag
gtctacaactccgcgcgcgccaaggcgcaggcggacggcaagggcggcgtcttcgacaag
gcggccgacaccgcgatcgcgtacagcaaggcccaggacaccgcgtccgggccgtcgttg
gggctgaagatcaagcacaaggtcttcgacaagctggtctacggcaagctgcgcgcggtc
ctcggcggccggggcgagtacgccatctccggcggcgccccgctgggcgagcggctcggc
cacttcttccggggcatcggcttcacggtgctggaggggtacggcctgaccgagtcgtgc
gcggcgaccgcgttcaacccgtgggaccggcagaagatcggcaccgtgggccagccgctg
cccggttccgtggtgcggatagcggacgacggcgaggtgctgctgcacggcgagcacctg
ttcaaggagtactggaacaacccgggcgcgacggcggaggcgctggccgacgggtggttc
cacaccggggacatcggcaccctggacgaggacgggtatctgcggatcaccggccgcaag
aaggagatcatcgtcacggcgggcggcaagaacgtggcccccgcggtgatcgaggaccgt
atccgcgcgcacgcgctggtcgcggagtgcatggtggtcggcgacggacggccgttcgtc
ggcgcgctgatcacgctggacgaggagttcctgacgcgctgggcggcggagcacggcaag
ccggcgggttccacggcctcgtccctgcgcgacgacccggacctgaacgccgcgatccag
gaggccgtgaacgacggcaacgcggcggtgtccaaggccgagtcggtgcgcaagttccgt
atcctcgcgtcccagttcacggaggactcgggccatctcacgccgtcgctgaagctcaag
cggaacgtggtggccaaggactacgcggacgacatcgaggcgatctacgcgaagtag
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