Streptomyces rochei: SRO_5474
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Entry
SRO_5474 CDS
T06265
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
srj
Streptomyces rochei
Pathway
srj03030
DNA replication
srj03410
Base excision repair
srj03420
Nucleotide excision repair
srj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
srj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SRO_5474
03410 Base excision repair
SRO_5474
03420 Nucleotide excision repair
SRO_5474
03440 Homologous recombination
SRO_5474
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
srj03032
]
SRO_5474
03400 DNA repair and recombination proteins [BR:
srj03400
]
SRO_5474
Enzymes [BR:
srj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SRO_5474
DNA replication proteins [BR:
srj03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
SRO_5474
DNA repair and recombination proteins [BR:
srj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
SRO_5474
NER (nucleotide excision repair)
GGR (global genome repair) factors
SRO_5474
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
DNA_pol_A_exo1
DNA_pol_lambd_f
HHH_5
HHH_2
Motif
Other DBs
NCBI-ProteinID:
BBC96650
LinkDB
All DBs
Position
6009289..6012015
Genome browser
AA seq
908 aa
AA seq
DB search
MAETASKKTDKTPGGSRPRLMLMDGHSLAYRAFFALPAENFTTATGQPTNAIYGFASMLA
NTLRDEAPTHFAVAFDVSRKTWRSERFTEYKANRSKSPDEFKGQVELIGELLDAMHAPRF
AVDGFEADDIIATLATQAEAEGFDVLIVTGDRDSFQLVSEHTTVLYPTKGVSELTRFTPE
KVLEKYGLTPAQYPDFAALRGDPSDNLPGIPGVGEKTAAKWINQFGSFAELVERVEEVKG
KAGQNLRDHLESVKLNRVLTELERQVELPKAVTDLERAPYDRKGVALVLDTLEIRNPSLR
ERLFAVDPGAEEADTTPVTTEGVEVDGTVLRTGELAPWLAEHGTQPLGVATVDTWALGTG
SVAEVALAAAGGAAAWFDPAELDEADENAFAAWLADTERPKVFHNAKGAMRVFAEHGWSI
EGVRMDTALAAYLVKPGRRSFDLDALSLEYLHRELAPAAAADGQLAFGTDEAAEAEALMI
QARAVLDLGEAFEGRLEEVGAADLLRDMELPTSALLARMERHGIAADRAHLDAMEQMFAG
AVQQAVKEAHAAAGHEFNLGSPKQLQEVLFNELALPKTKKTKTGYTTDADALAWLATQTD
NELPVIMLRHREQAKLRVTVEGLIKTIAGDGRIHTTFNQTVAATGRLSSTDPNLQNIPVR
TDEGRAIRRGFVVGEGFESLMTADYSQIELRVMAHLSEDEGLIRAFTSGEDLHTTAASQV
FGVEPAAVDAEMRRKIKAMSYGLAYGLSAFGLSQQLNIEAGESRALMDAYFERFGGVRDY
LRRAVDEARATGYTATVFGRRRYLPDLNSDNRQRREAAERMALNAPIQGTAADIVKIAML
KVDTALRAADLKSRMLLQVHDEIVLEIAPGERARVEEIVRHEMSGAVTLRAPLDVSVGVG
PDWESAAH
NT seq
2727 nt
NT seq
+upstream
nt +downstream
nt
gtggcagagacagcatcgaagaagaccgacaagacccccggcggctcccgtccccggctg
atgctcatggacgggcactcgctggcctaccgcgcgttcttcgcgctgcccgcggagaac
ttcaccaccgcgacgggccagccgacgaacgcgatctacgggttcgcgtcgatgctggcc
aacaccctgcgtgacgaggcgcccacccacttcgcggtggccttcgacgtctcccgcaag
acctggcgctccgagcgcttcaccgagtacaaggcgaaccgctccaagagccccgacgag
ttcaagggccaggtcgagctgatcggcgagctcctggacgcgatgcacgcgccgcgcttc
gccgtcgacggcttcgaggccgacgacatcatcgccaccctcgccacccaggccgaggcc
gagggcttcgacgtactgatcgtcaccggcgaccgcgactccttccagctggtcagcgag
cacaccaccgtgctctacccgaccaagggcgtctccgagctgacccggttcaccccggag
aaggttctggagaagtacggcttgacgcccgcccagtaccccgacttcgccgccctgcgc
ggcgacccgtccgacaacctccccggcatccccggcgtcggcgagaagaccgccgcgaag
tggatcaaccagttcggctccttcgccgagctggtcgagcgcgtcgaggaggtcaagggc
aaggcgggccagaacctccgcgaccacctggagtcggtcaagctcaatcgcgtcctcacc
gagctggagcgccaggtcgagctgccgaaggcggtcaccgacctggagcgcgcgccgtac
gaccgcaagggcgtcgcgctggtcctggacaccctggagatccgcaacccgtccctgcgc
gagcgcctcttcgccgtcgacccgggcgccgaggaggccgacaccaccccggtcaccacc
gagggcgtcgaggtcgacggcaccgtcctgcgcaccggcgagctggccccctggctcgcc
gagcacggcacgcagcccctgggcgtcgccaccgtcgacacctgggcgctgggcaccggc
tcggtcgccgaggtcgccctggcggcggccgggggagcggccgcctggttcgaccccgcg
gagctggacgaggccgacgagaacgcgttcgcggcctggctggcggacaccgagcgcccc
aaggtgttccacaacgccaagggcgccatgcgggtcttcgccgagcacggctggagcatc
gagggcgtgcgcatggacaccgcgctcgccgcctacctggtcaagcccggccggcgctcc
ttcgacctggacgcgctgtccctggagtacctgcaccgcgagctggcccccgccgccgcg
gccgacggccagctggccttcggcacggacgaggcagccgaggccgaggccctgatgatc
caggcccgtgccgtcctggacctcggcgaggcgttcgagggccgcctggaggaggtcggc
gccgccgatctgctgcgcgacatggagctgcccacctccgccctgctcgcccgcatggag
cggcacggcatcgccgcggaccgcgcgcacctcgacgcgatggagcagatgttcgcgggc
gcggtgcagcaggccgtgaaggaggcgcacgcggccgcgggccacgagttcaacctgggc
tcgcccaagcagctccaggaagtcctcttcaacgagctggccctgcccaagaccaagaag
accaagaccggctacaccacggacgccgacgccctggcctggctcgccacccagacggac
aacgagctgccggtgatcatgctccgccaccgcgagcaggccaagctccgcgtcaccgtc
gagggcctgatcaagaccatcgcgggcgacggccgtattcacaccaccttcaaccagacg
gtggccgcgaccggccggctgtcctccacggacccgaacctccagaacatcccggtccgc
accgacgagggccgggcgatccgccgcggcttcgtcgtcggcgagggcttcgagtccctg
atgaccgccgactacagccagatcgagctgcgcgtgatggcccacctctccgaggacgag
ggcctgatcagggcgttcacctccggcgaggacctgcacaccacggccgcctcccaggtc
ttcggcgtcgagccggccgcggtcgacgcggagatgcgccgcaagatcaaggcgatgtcg
tacggcctggcgtacggcctgtccgcgttcggcctctcccagcagctgaacatcgaggcg
ggggagtcccgcgccctgatggacgcgtacttcgagcgcttcggcggggtccgcgactac
ctgcgccgcgccgtggacgaggccagggccacgggctacacggcgaccgtcttcgggcgc
cgccgctatctgcccgacctcaacagcgacaaccgccagcgccgcgaggccgccgagcgg
atggccctgaacgcgcccatccagggcacggcggcggacatcgtcaagatcgccatgctc
aaggtggacaccgccctgcgggccgcggacctgaagtcccggatgctgctccaggtccac
gacgaaatcgtcctggagatcgcccccggcgagcgcgcccgcgtcgaggagatcgtccgc
cacgagatgtccggcgccgtgaccctccgggcccctctggacgtctcggtcggcgtcggc
ccggactgggagtcggccgcgcactag
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