Streptomyces rochei: SRO_6186
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Entry
SRO_6186 CDS
T06265
Name
(GenBank) exonuclease SbcCD subunit D
KO
K03547
DNA repair protein SbcD/Mre11
Organism
srj
Streptomyces rochei
Brite
KEGG Orthology (KO) [BR:
srj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
srj03400
]
SRO_6186
DNA repair and recombination proteins [BR:
srj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
SRO_6186
Archaeal homologous recombinant proteins
SRO_6186
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
FBPase_2
Motif
Other DBs
NCBI-ProteinID:
BBC97362
LinkDB
All DBs
Position
6772285..6773448
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AA seq
387 aa
AA seq
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MRLLHTSDWHLGRAFHRVSMLGAQAEFIGHLVATVRERAVDAVVVSGDVYDRAVPPLAAV
ELFDDALHRLAGLGVPTVMISGNHDSARRLGVGAGLIDRAGIHLRTEPSAVATPVVLADA
HGDVAFYGLPYLEPALVKDEFGVEKAGHEAVLGAAMDRVRADLATRPAGTRCVVLAHAFV
TGGRASDSERDITVGGVAAVPAGIFDGADYTALGHLHGCQTLTERVRYSGSPLAYSFSEA
DHRKSMWLIDLAADGAVTAERLDCPAPRPLARIRGTLEELLADPDLDRHTDAWIEATLTD
AVRPPEPMARLTERFPHTLSLVFAPERAPDDPGVSYARRLAGRSDQQIAQDFVAHVRGAG
PDERESAVLREAFDAVRADAVVREVAK
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atgagactcctgcacacgtccgactggcatctcggccgggccttccaccgggtgagcatg
ctcggggcccaggccgagttcatcggacacctggtcgccaccgtgcgcgagcgcgcggtg
gacgcggtggtcgtgtcgggagacgtgtacgaccgcgcggtgcccccgctggccgccgtc
gagctgttcgacgacgccctgcaccgcctcgccggcctcggcgtgcccacggtgatgatc
tcgggcaaccacgactcggcccgccgcctcggcgtcggcgccggactcatcgaccgcgcc
ggcatccatctgcgcaccgagccgtccgccgtggccaccccggtggtgctcgccgacgcc
catggagacgtcgccttctacgggctgccgtacctcgaacccgccctggtgaaggacgag
ttcggggtcgagaaggccggccatgaggccgtcctcggggccgccatggaccgggtccgc
gccgacctcgcgacccgcccggcgggcacccgctgcgtcgtcctcgcccatgccttcgtc
accggcggccgggcgagcgacagcgagcgggacatcactgtcggcggggtcgccgccgta
ccggccgggatcttcgacggcgccgactacacggccctcggccatctgcacggctgccag
accctcaccgagcgggtgcgctactccggctccccgctcgcctactccttctccgaggcc
gaccaccgcaagagcatgtggctgatcgacctcgccgccgacggcgccgtgaccgccgaa
cgcctcgactgcccggcgccccgcccgctggcccggatccgaggcaccctggaggaactg
ctcgccgacccggacctcgaccgccacaccgacgcctggatcgaggccaccctcaccgac
gccgtccggccgcccgagccgatggccaggctcaccgagcgcttcccgcacaccctgagc
ctggtcttcgcccccgaacgcgccccggacgaccccggggtctcctacgcccgccgcctc
gcgggccgcagcgaccagcagatcgcccaggacttcgtcgcccatgtccggggcgccgga
cccgatgagcgcgagtctgccgtgctgcgcgaggcgttcgacgccgtccgcgccgacgcc
gtcgtgcgggaggtggccaagtga
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