Streptomyces rectiverticillatus: FGW37_18040
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Entry
FGW37_18040 CDS
T06927
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
srk
Streptomyces rectiverticillatus
Brite
KEGG Orthology (KO) [BR:
srk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
srk03032
]
FGW37_18040 (topA)
03400 DNA repair and recombination proteins [BR:
srk03400
]
FGW37_18040 (topA)
Enzymes [BR:
srk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
FGW37_18040 (topA)
DNA replication proteins [BR:
srk03032
]
Prokaryotic type
DNA Topoisomerases
FGW37_18040 (topA)
DNA repair and recombination proteins [BR:
srk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
FGW37_18040 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
HC2
Toprim_2
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
QLE73235
LinkDB
All DBs
Position
4104087..4106957
Genome browser
AA seq
956 aa
AA seq
DB search
MSPTSETAKGGRRLVIVESPAKAKTIKGYLGPGYVVEASVGHIRDLPNGAAEVPAKYKGE
SWARLGVNVEKDFQPIYVVNHDKKDQVKKLKELLAESDELFLATDEDREGEAIAWHLQEV
LKPKVPVRRMVFHEITKDAIQAAVASPRELNKKLVDAQETRRILDRLYGYEVSPVLWKKV
MPRLSAGRVQSVATRLVVERERERIAFRSAEYWDLTGSFSTGRSGDNSDPATLTARLASV
DGRRVAQGRDFGSNGQLKDAAQVLHLDEANARALAAALADTSFSVRSVESKPYRRSPYAP
FRTTTLQQEASRKLGFGAKATMQVAQKLYENGFITYMRTDSTTLSDTAVNAARAQVTQLY
GADYLPEKPRTYAGKVKNAQEAHEAIRPSGDRFRTPAETGLTGDQFRLYELIWKRTVASQ
MKDATGNSVTVRIAGRASDGREAEFSASGKTITFHGFMKAYVEGADDPNAELDDRERRLP
QVAEGDPLAAQEITADGHATKPPARYTEASLVKELEEREIGRPSTYASIIGTILDRGYVF
KKGTALVPSFLSFAVVNLLEKHFGRLVDYDFTASMEEDLDRIARGEAQAVPWLRRFYFGE
GTEGAAGGAAEAGNGDGDHLGGLKELVTDLGAIDAREVSSFPVGDGIVLRVGRYGPYVER
GEKDAEGHQRADVPEDLAPDELTVEYAEELLAKPSGDFELGTDPGTGHQIIARDGRYGPY
VTEVLPEGTPKTGKNAVKPRTASLFKSMSLDTVTLDDALRLMSLPRVVGTDAEGVEITAQ
NGRYGPYLKKGTDSRSLETEDQLFSITLDEALAIYAQPKQRGRAAAKPPLKELGTDPVSE
RPVVVKDGRFGPYVTDGETNATLRRDDDVETITPERGYELLAEKRAKGPAKKTAKKAAAK
KAPAKKTAAKKTAAKKTAAKKTTTAKKTTASKTASKTAAKKTTAKKVAAAAQAADE
NT seq
2871 nt
NT seq
+upstream
nt +downstream
nt
ttgtccccgaccagcgagaccgcaaagggcggccgccgactcgtcatcgtcgagtcgcct
gccaaggcgaagacgatcaagggctacctcggccccggatacgtcgtcgaggcgagcgtc
gggcacatccgtgacctgccgaacggggccgccgaggtcccggcgaagtacaagggcgag
tcctgggcccgcctcggcgtcaacgtcgagaaggacttccagccgatctacgtcgtgaac
cacgacaagaaggaccaggtcaagaagctcaaggagctgctggccgagtccgacgagctc
ttcctcgccaccgatgaggaccgcgagggcgaggccatcgcctggcacctgcaggaagtc
ctcaagcccaaggtccccgtccgccgcatggtcttccacgagatcaccaaggacgcgatc
caggccgccgtcgccagcccgcgcgagctgaacaagaagctcgtcgacgcccaggagacc
cgccgcatcctcgaccgcctctacggctacgaggtctcgccggtcctgtggaagaaggtc
atgccgcggctgtcggccggccgcgtgcagtccgtggccacccgcctcgtcgtcgagcgg
gagcgcgagcgcatcgccttccgctccgccgagtactgggacctcacgggcagcttcagc
accggccgctccggtgacaacagcgaccccgcgaccctcactgcccgtctggcctcggtc
gacggccggcgcgtggcccagggccgcgacttcggctcgaacggccagctgaaggacgcc
gcccaggtgctccacctggacgaggccaacgcccgcgcgctggccgccgccctcgccgac
acctcgttctcggtgcgctcggtcgagtccaagccgtaccgccgctcgccgtacgccccg
ttccgcacgacgacgctgcagcaggaggcctcgcgcaagctgggcttcggcgcgaaggcc
accatgcaggtggcccagaagctgtacgagaacggcttcatcacctatatgcgtacggac
tccacgacgctgtccgacaccgccgtgaacgccgcccgtgcgcaggtcacccagctctac
ggcgccgactacctgccggagaagccgcgcacgtacgccggcaaggtcaagaacgcccag
gaggcgcacgaggcgatccggccttcgggtgatcgtttccgcacgcccgccgagaccggt
ctgaccggcgaccagttccgcctctacgagctgatctggaagcggaccgtcgcctcccag
atgaaggacgcgaccggtaactcggtcactgtccggatcgccggccgggcgagcgacggc
cgggaggccgagttcagcgcctccggcaagaccatcaccttccacggcttcatgaaggcc
tacgtggagggcgcggacgacccgaacgccgagctcgacgaccgcgagcgccgcctcccg
caggtcgccgagggcgacccgctggcggcccaggagatcacggccgacggccacgccacc
aagccgcccgcccgctacaccgaggcctcgctggtcaaggagctggaggagcgggagatc
ggccgcccgtcgacctacgcgtcgatcatcggcaccatcctcgaccgcggctacgtcttc
aagaagggcacggcgctcgtcccgtccttcctgagcttcgccgtcgtcaacctgctggag
aagcacttcggccggctcgtcgactacgacttcaccgcctccatggaggaggacctcgac
cgcatcgcccgcggcgaggcccaggctgtgccgtggctgcgccggttctacttcggcgag
ggcaccgagggtgccgcgggcggcgccgccgaggccggcaacggcgacggcgaccacctc
ggcggcctcaaggagctcgtgaccgacctcggtgcgatcgacgcccgcgaggtgtcctcc
ttccccgtcggcgacggcatcgtgctgcgcgtcggccgctacgggccgtacgtcgagcgc
ggcgagaaggacgccgagggccaccagcgggctgacgtgcccgaggacctcgcgcccgac
gagctgaccgtcgagtacgcggaggagctgctcgccaagccgagcggcgacttcgagctg
ggcaccgaccccggcaccggtcaccagatcatcgccagggacggccgctacggcccttac
gtcaccgaggtccttcccgagggcaccccgaagaccggcaagaacgcggtcaagccgcgc
acggcctcgctcttcaagtccatgtccctggacacggtcaccctcgacgacgcgctccgg
ctgatgtcgctgccgcgcgtggtgggcaccgacgccgagggcgtcgagatcaccgcgcag
aacggccgctacggcccgtatctgaagaagggcaccgactcgcggtcgctggagaccgag
gaccagctcttcagcatcacgctggacgaggccctcgccatctacgcccagcccaagcag
cgtgggcgcgccgcggccaagccgccgctgaaggagctgggcaccgacccggtcagcgag
cgcccggtcgtggtcaaggacggccgcttcggcccgtacgtgacggacggcgagaccaac
gccaccctgcgccgtgacgacgacgtcgagacgatcacgcctgagcgcggctacgagctc
ctggcggagaagcgcgccaagggcccggcgaagaagacggccaagaaggccgccgcgaag
aaggcgccggcgaagaagaccgccgccaagaagacggctgccaagaagaccgcggcgaag
aagacgacgaccgcgaagaagacgacggcgtccaagacggcctccaagacggccgccaag
aagacgaccgccaagaaggtggctgcggctgcgcaggccgccgacgagtga
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