Streptomyces rectiverticillatus: FGW37_19455
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Entry
FGW37_19455 CDS
T06927
Name
(GenBank) DEAD/DEAH box helicase
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
srk
Streptomyces rectiverticillatus
Pathway
srk03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
srk00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
FGW37_19455
09124 Replication and repair
03420 Nucleotide excision repair
FGW37_19455
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
srk03021
]
FGW37_19455
03400 DNA repair and recombination proteins [BR:
srk03400
]
FGW37_19455
Enzymes [BR:
srk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FGW37_19455
Transcription machinery [BR:
srk03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
FGW37_19455
DNA repair and recombination proteins [BR:
srk03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
FGW37_19455
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
SNF2-rel_dom
IMD
DUF447_C
Motif
Other DBs
NCBI-ProteinID:
QLE73472
LinkDB
All DBs
Position
complement(4392823..4394469)
Genome browser
AA seq
548 aa
AA seq
DB search
MTCLIVQSDKTLLLEVDHEQADACRRAIAPFAELERAPEHIHTYRVTPLGLWNARAAGHD
AEQVVDALVTYSRYPVPHSLLVDIAETMDRYGRLRLVKHPTHGLVLESTDRPVLEEILRS
KKIQPLVGARIDPDTVAVHPSERGQIKQTLLKLGWPAEDLAGYVDGEAHAIELAEDGWAL
RPYQQQAVEGFWHGGSGVVVLPCGAGKTLVGAGAMAKAKATTLILVTNTVSARQWKHELV
KRTSLTEDEIGEYSGTKKEIRPVTIATYQVLTTKRKGIYPHLELFDSRDWGLVVYDEVHL
LPAPVFKFTADLQARRRLGLTATLVREDGRESDVFSLIGPKRFDAPWKEIEAQGYIAPAD
CVEVRVNLTDSERLAYATAETEEKYRYCATTATKRRVTEALVARHKGEQTLVIGQYIDQL
DELGEHLDAPVIKGETSNAQREKLFDAFRQGELSVLVVSKVANFSIDLPEATVAIQVSGT
FGSRQEEAQRLGRVLRPKADGHEARFYSVVARDTVDQDFAAHRQRFLAEQGYAYRIVDAD
SLLAGDEA
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
gtgacctgcttgatcgtccagagcgacaagacgctgctcctggaggtggaccacgagcag
gccgacgcctgccgtcgcgccatcgcccccttcgccgagctggagcgcgccccggagcac
atccacacctaccgggtcaccccgctgggcctgtggaacgcccgggcggccgggcatgac
gccgagcaggtcgtcgacgccctcgtcacgtactcgcgctaccccgtcccgcactccctc
ctcgtcgacatcgcggagacgatggaccgctacgggcggctgcggctggtcaagcacccc
acgcacgggctggtcctggagtccacggaccgccccgtcctggaggagatcctccgctcg
aagaagatccagccgctcgtcggcgcccggatcgacccggacacggtcgccgtgcacccc
tccgagcgcgggcagatcaagcagacgctgctgaagctgggctggccggcggaggacctg
gccgggtacgtggacggcgaggcgcacgcgatcgagctggcggaggacggctgggcgctg
cggccgtaccagcagcaggccgtcgaggggttctggcacggcggttcgggcgtggtcgtg
ctgccctgcggcgcgggcaagacgctcgtgggcgccggcgccatggccaaggccaaggcg
accacgctgatcctggtcacgaacacggtctccgcgcggcagtggaagcacgagctggtg
aagcgcacgtcgctgaccgaggacgagatcggcgagtacagcggtacgaagaaggagatc
cggccggtcaccatcgccacgtaccaggtcctcacgacgaagcggaagggcatctacccg
cacctggagctgttcgactcccgggactggggcctggtcgtctacgacgaggtgcacctg
ctgccggcgccggtcttcaagttcacggccgacctgcaggcgcggcggcggctcggcctg
acggcgacgctcgtgcgcgaggacgggcgcgagtccgacgtcttctccctcatcggcccg
aagcgcttcgacgcgccgtggaaggagatcgaggcgcagggctacatcgcgccggccgac
tgcgtggaggtccgcgtcaacctcacggactccgagcggctcgcctacgcgacggccgag
acggaggagaagtaccgctactgcgcgacgaccgccacgaagcggcgcgtcacggaggcg
ctggtggcccggcacaagggcgagcagaccctggtcatcgggcagtacatcgaccagctc
gacgagctcggcgagcacctcgacgcgcccgtgatcaagggcgagaccagcaatgcccag
cgcgagaagctcttcgacgccttccggcagggcgagctctcggtgctcgtggtctcgaag
gtcgcgaacttctccatcgaccttcccgaggcgacggtcgccatccaggtgtcgggcacg
ttcggctcccggcaggaggaggcccagcgcctcggccgggtgctgcgcccgaaggcggac
ggtcacgaggcgcgcttctactcggtggtcgcccgcgacaccgtcgaccaggacttcgcg
gcgcaccggcagcggttcctggccgagcaggggtacgcgtaccgcatcgtggacgcggac
tcgcttctggcgggcgacgaggcgtaa
DBGET
integrated database retrieval system
