Streptomyces rectiverticillatus: FGW37_19640
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Entry
FGW37_19640 CDS
T06927
Symbol
thpR
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
srk
Streptomyces rectiverticillatus
Brite
KEGG Orthology (KO) [BR:
srk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
srk03016
]
FGW37_19640 (thpR)
Enzymes [BR:
srk01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
FGW37_19640 (thpR)
Transfer RNA biogenesis [BR:
srk03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
FGW37_19640 (thpR)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
Motif
Other DBs
NCBI-ProteinID:
QLE73504
LinkDB
All DBs
Position
4433975..4434538
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AA seq
187 aa
AA seq
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MRLFAAVLPPEAAVVELTDATASLRGLPGAERLRWTEPSGWHFTLAFLGEVDPELLPELT
ERLGRAAHRHPPHELRFAGGGRFGDRVLWVGADGERTILRDLARSAAAGARRAGVAVDTT
HDFRPHLTLARAAGPVNLRPYAESLAGFSGTPWTVARLELMRSRLPAGGAPGERPRYETV
AAWELGG
NT seq
564 nt
NT seq
+upstream
nt +downstream
nt
atgcgactcttcgccgctgtcctgccgcccgaggcggccgtcgtcgagctgacggacgcc
accgcgtccctgcgcgggctgcccggtgcggagcggctgcgctggaccgagccgtccggc
tggcacttcacgctcgccttcctcggcgaggtcgacccggagctgctgccggagctcacc
gagcggctggggcgcgccgcccaccgccacccgccgcacgaactgcgcttcgccggcggc
gggcggttcggggaccgggtgctgtgggtcggcgcggacggcgagcggacgatcctgcgc
gacctggcgcgctcggccgcggccggggcgcgccgggcgggcgtcgccgtcgacaccacg
cacgacttccgcccccacctcaccctcgcccgcgccgcgggcccggtgaacctccggccg
tacgccgagagcctcgccggcttcagcggcacgccgtggaccgtggcgcgcctggagctc
atgcggagccggcttccggccggcggcgctcccggggagcgtccccgttacgagacggtg
gccgcctgggagctgggcgggtag
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