Streptomyces rectiverticillatus: FGW37_24460
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Entry
FGW37_24460 CDS
T06927
Name
(GenBank) RecQ family ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
srk
Streptomyces rectiverticillatus
Pathway
srk03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
srk00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FGW37_24460
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
srk03019
]
FGW37_24460
03400 DNA repair and recombination proteins [BR:
srk03400
]
FGW37_24460
Enzymes [BR:
srk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FGW37_24460
Messenger RNA biogenesis [BR:
srk03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
FGW37_24460
DNA repair and recombination proteins [BR:
srk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
FGW37_24460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RecQ_Zn_bind
AAA_30
Pribosyltran
Motif
Other DBs
NCBI-ProteinID:
QLE74325
LinkDB
All DBs
Position
complement(5513026..5515191)
Genome browser
AA seq
721 aa
AA seq
DB search
MTNEDLRASADAVLARLVGDPTGKARLREDQWLAIEALVAHHRRALVVQRTGWGKSAVYF
VATALLRARGSGPTVIVSPLLALMRNQVDAAARAGIHARTINSANVEEWDTVQAEVAAGE
VDVLLVSPERLNNPDFRDQVLPKLAAATGLLVVDEAHCISDWGHDFRPDYRRLRTMLADL
PPGVPVLATTATANARVTADVAEQLGTGEESTQALVLRGALDRESLSLSVLQLPDAAHRL
AWLADHLAELPGSGIIYTLTVAAAEEVTAFLRRCGHTVASYTGKTENADRLQAEEDLLAN
RVKALVATSALGMGFDKPDLGFVVHLGSPSSPIAYYQQVGRAGRGVEHAEVLLLPGREDE
AIWKYFASLAFPSEEQVRRTLEVLAASDRPVSLPALEPQVELRRSRLETMLKVLDVDGAV
HRVRGGWTATGRPWTYDAERYAWVERQRGAEQQAMRDYAATTQCRMEFLRRQLDDEQAAP
CGRCDNCTGPRFSTEVSAGALDASRGELGRPGVEVEPRRMWPTGMPAVGVDLKGRIPAGE
QAAPGRALGRLSDIGWGNRLRPLLAPHTPDGPVPDDVAAAVVTVLADWARGPGGWASGAA
DAPGRPVGVVTLASRTRPQLIRSLGEHIAAVGRMPLLGTVEYGGADTDTRLPRTNSAQRL
RALDGALTVPPALAEALASAGGPVLLVDDLTDTGWTLAVAARLLLRAGAPQVFPLVLAVQ
G
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atgacgaacgaagacctccgcgcctcggccgatgccgtcctggcccgcctcgtcggcgac
cctacgggcaaggcgagactgcgggaggaccagtggctggcgatcgaggcgctggtcgcc
caccaccgtcgcgctctggtcgtgcagcgcacggggtggggcaagtcggcggtgtacttc
gtcgcgacggcgctgctgcgtgcccggggcagcgggcccacggtgatcgtctcgccgctg
ctcgcgctgatgcgcaaccaggtggacgccgcggcacgggccgggatccacgcgcgcacg
atcaactccgccaacgtcgaggagtgggacaccgtccaggccgaggttgccgcgggcgag
gtcgatgtgctgctggtgagccccgagcggctcaacaaccccgacttccgcgatcaggtc
ctgcccaagctcgccgccgcgaccggcctgctggtcgtcgacgaggcccactgcatctcc
gactggggccacgacttccggcccgactaccgccgcctgcgcacgatgctcgccgatctt
ccgcccggcgtccccgtcctcgccacgacggccacggccaacgcccgcgtcaccgccgac
gtcgccgagcagctgggcacgggcgaggagtccacgcaggcgctggtgctgcgcggcgcg
ctggaccgggagagcctgagcctcagcgtcctgcagctgcccgacgccgcacaccggctg
gcctggctcgccgaccacctcgccgagctccccggctccggcatcatctacacgctcacc
gtcgcggccgccgaggaggtcaccgccttcctgcgccggtgcggccacacggtggcctcc
tacaccggcaagacggagaacgcggaccgcctgcaggccgaggaggacctgctggccaac
cgcgtcaaggcgctcgtcgccacctcggcgctgggcatgggcttcgacaagccggacctg
ggcttcgtggtccacctgggctccccctcctcccccatcgcctactaccagcaggtcggc
cgcgcgggccgcggcgtcgagcacgccgaggtcctgctgctcccgggccgggaggacgag
gcgatctggaagtacttcgcctccctcgccttcccctcggaggagcaggtccgccgcacc
ctggaagtcctcgccgcatcggaccgccccgtctccctgccggctctggagccccaggtc
gagctgcggcgttcgcgcctggagaccatgctcaaggtcctcgacgtcgacggtgccgtg
caccgggtgcgcggcggctggaccgcgacgggccgcccgtggacgtacgacgccgagcgg
tacgcctgggtggagcggcagcgcggggccgagcagcaggcgatgcgcgactacgccgcc
acgacgcagtgccggatggagttcctgcgccgtcagctggacgacgagcaggcggccccg
tgcgggcgctgcgacaactgcacggggccgcgcttcagcacggaggtctccgccggggcg
ctcgacgcgtcgcggggcgagctggggcgcccgggcgtggaagtcgaaccccgccggatg
tggcccacgggaatgccggccgtaggcgtcgacctcaagggccgcatcccggccggtgaa
caggccgcgcccggccgggccctcgggcggctgtccgacatcggctggggcaaccggctg
cgccctctcctcgccccgcacactccggacgggcctgttccggacgacgtcgcggccgcg
gtggtgaccgtgctggccgactgggcccgcgggcccggcggttgggcctccggggcggcg
gacgcccccggccgccccgtgggcgtcgtcacgctcgcctcgcgcacccggccgcagctg
atccgctcgctcggcgagcacatcgccgcggtcggccggatgcccctgctgggcacggtc
gagtacggaggcgcggacaccgacacccggctgccccgcaccaacagcgctcagcggctg
cgtgcgctggacggcgcgctgacggtgccgccggcccttgcggaggccctggcctcggcc
ggcgggccggtcctgctcgtggacgatctcaccgacaccgggtggacgctggccgtggcc
gcgcggctgctgctgcgcgccggtgcaccgcaggtgttcccgctggttctggcggtgcag
ggctag
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