Streptomyces rectiverticillatus: FGW37_25355
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Entry
FGW37_25355 CDS
T06927
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
srk
Streptomyces rectiverticillatus
Brite
KEGG Orthology (KO) [BR:
srk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
srk03016
]
FGW37_25355
Enzymes [BR:
srk01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
FGW37_25355
Transfer RNA biogenesis [BR:
srk03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
FGW37_25355
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
DNA_pol_A_exoN
HRDC
Motif
Other DBs
NCBI-ProteinID:
QLE74478
LinkDB
All DBs
Position
complement(5759887..5761164)
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AA seq
425 aa
AA seq
DB search
MTDAQETAADTPLRTTGGAPPDDVVSAPIPLLEPREGIPPVVADNDALERVVAAFAAGTG
PVAVDAERASGYRYGQRAYLVQLRRDGAGSALIDPVGCPDLSALGDAIADAEWVLHAATQ
DLPCLREIGMTPTRLFDTELAGRLAGFARVGLGAMVENVLGYALEKGHSAVDWSTRPLPD
PWLRYAALDVELLVDLRDALEEELDRQGKLEWARQEFDAIASAPPAPPRKDPWRRTSGMH
KVRRRRQMAVVRELWTARDHVAQRRDVSPGKVLGDAAIVEAALNMPPNAHALAALPGFGH
RMSRKQLEQWQAAIDRARAIPDAELPQPGQPLTGPPPPRAWADKDPEAAARLTAARTAVS
ELAERLTMPQENLITPDTVRRLCWEPPAHPTPEAVADVLAAYGARPWQVEQVTPALVKAL
TEGAA
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgacgcccaagaaaccgcagcagacacaccactgcgaaccaccgggggcgctccc
ccggacgacgtcgtttcggcgccgatccccctactggagccacgcgagggcatcccgccg
gtcgtcgctgacaacgatgccctggagcgggtcgtcgccgcgttcgcagccggcaccggc
cccgtcgccgtcgacgccgagcgcgcctccggataccgctacggccagcgcgcctacctc
gtccagctgcgccgtgacggtgccggcagcgcgctcatcgacccggtcggctgccccgac
ctgtccgcgctcggcgacgccatcgccgacgccgaatgggtgctgcatgcagccacccag
gacctgccgtgcctgcgcgagatagggatgacgccgacgcggctgttcgacaccgagctg
gccggacggctcgccgggttcgcacgggtgggtctcggagccatggtggagaacgtcctg
gggtacgccctggagaaggggcactccgccgtcgactggtcgacccgccccctgcccgac
ccctggctgcgctacgccgccctcgacgtggagctcctcgtcgacctgcgcgacgcgctg
gaggaggagctggaccgccagggcaagctggagtgggcccggcaggagttcgacgccatc
gcctccgccccgcccgccccgccgcgcaaggacccctggcgccgtacgtccgggatgcac
aaggtgcgcaggcgccgccagatggcggtggtgcgcgagctgtggaccgcccgtgaccac
gtggcgcagcggcgcgacgtctcccccggcaaggtgctgggcgacgccgcgatcgtcgag
gccgcgctcaacatgccgccgaacgcgcacgccctggcggcgctgcccggtttcgggcac
cgcatgagccgcaagcagctggagcagtggcaggcggcgatcgaccgcgcccgcgcgatc
ccggacgccgaactgccgcagcccggccagccgctgaccggccccccgccgccgcgcgcc
tgggcggacaaggacccggaggccgcagcccggctcaccgcggcccgcacggccgtctcc
gagctcgccgagcgcctcaccatgccgcaggagaacctgatcactccggacacggtgcgg
aggctgtgctgggagccgcccgcgcatcccacgccggaggcggtggcggacgtcctcgcc
gcgtacggggcgcgtccgtggcaggtggaacaggtgaccccggccctggtgaaggccctc
acggagggtgcggcctga
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